RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 SERPINB8P50452 374 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 RAB7AP51149 207 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 AP1S2P56377 157 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 IHHQ14623 411 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 ZNF829Q3KNS6 432 aaPredicted RBP1.46□□□□□ -2.18
VPS13C-207ENST00000558919 HIKESHIQ53FT3 197 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 MED27Q6P2C8 311 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 SMARCD3Q6STE5 483 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 RTL4Q6ZR62 310 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 USP50Q70EL3 339 aaPredicted RBP1.46□□□□□ -2.18
VPS13C-207ENST00000558919 UNC93AQ86WB7 457 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 ERO1BQ86YB8 467 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 GPR26Q8NDV2 337 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 C19orf18Q8NEA5 215 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 PROKR2Q8NFJ6 384 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 CA5BP1Q8WTZ4 195 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 HGDQ93099 445 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 APH1AQ96BI3 265 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 ZBED3Q96IU2 234 aaPredicted RBP1.46□□□□□ -2.18
VPS13C-207ENST00000558919 TEAD3Q99594 435 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 AGMATQ9BSE5 352 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 IL22Q9GZX6 179 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 BLZF1Q9H2G9 400 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 CSNK1G1Q9HCP0 422 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 RRAGDQ9NQL2 400 aaPredicted RBP1.46□□□□□ -2.18
VPS13C-207ENST00000558919 NACADO15069 1562 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 SIGLEC1Q9BZZ2 1709 aa1.46□□□□□ -2.18
VPS13C-207ENST00000558919 MROH5Q6ZUA9 1318 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 LOXHD1Q8IVV2 1947 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 SMIM26A0A096LP01 95 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 SLC22A20A6NK97 555 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 ZNF99A8MXY4 864 aaPredicted RBP1.45□□□□□ -2.18
VPS13C-207ENST00000558919 FAM25EA8MYX2 175 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 MPDU1O75352 247 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 SCELO95171 688 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 PFN1P07737 140 aaKnown RBP1.45□□□□□ -2.18
VPS13C-207ENST00000558919 TPM1P09493 284 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 GABRG2P18507 467 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 MSR1P21757 451 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 CASQ1P31415 396 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 CD70P32970 193 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 BMI1P35226 326 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 POLR2IP36954 125 aaKnown RBP1.45□□□□□ -2.18
VPS13C-207ENST00000558919 NUP62P37198 522 aaPredicted RBP1.45□□□□□ -2.18
VPS13C-207ENST00000558919 GALR1P47211 349 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 BCAP31P51572 246 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 NDUFA8P51970 172 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 TAS2R39P59534 338 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 TAS2R46P59540 309 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 OR2B8PP59922 312 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 CYP24A1Q07973 514 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 GABRA6Q16445 453 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 C5orf64Q2M2E5 130 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 TPRG1LQ5T0D9 272 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 ZFAND6Q6FIF0 208 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 ULK3Q6PHR2 472 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 MRPL21Q7Z2W9 205 aaKnown RBP1.45□□□□□ -2.18
VPS13C-207ENST00000558919 RCN3Q96D15 328 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 DYNLL2Q96FJ2 89 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 CERS2Q96G23 380 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 UQCC2Q9BRT2 126 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 TMEM243Q9BU79 118 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 RGCCQ9H4X1 137 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 ZNF442Q9H7R0 627 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 CYP3A43Q9HB55 503 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 PRSS16Q9NQE7 514 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 TREX1Q9NSU2 369 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 IL37Q9NZH6 218 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 ZNF257Q9Y2Q1 563 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 RHBDD3Q9Y3P4 386 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 COMMD3-BMI1R4GMX3 469 aa1.45□□□□□ -2.18
VPS13C-207ENST00000558919 ERICH4A6NGS2 130 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 J3QRE1 110 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 ZNF701M0R085 212 aaPredicted RBP1.44□□□□□ -2.18
VPS13C-207ENST00000558919 OR7C2O60412 319 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 CTNSO60931 367 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 DEDDO75618 318 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 CNMDO75829 334 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 KLHL2O95198 593 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 OTCP00480 354 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 CATP04040 527 aaKnown RBP1.44□□□□□ -2.18
VPS13C-207ENST00000558919 IGLV7-43P04211 117 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 S100A9P06702 114 aaKnown RBP1.44□□□□□ -2.18
VPS13C-207ENST00000558919 PRKACAP17612 351 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 TUBG1P23258 451 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 PCK1P35558 622 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 ETV1P50549 477 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 CLDN6P56747 220 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 CARD18P57730 90 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 YWHAEP62258 255 aaKnown RBP1.44□□□□□ -2.18
VPS13C-207ENST00000558919 IFITM3Q01628 133 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 MEF2CQ06413 473 aaPredicted RBP1.44□□□□□ -2.18
VPS13C-207ENST00000558919 DMC1Q14565 340 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 SLC25A35Q3KQZ1 300 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 KLHL12Q53G59 568 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 HSP90AA4PQ58FG1 418 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 DEGS2Q6QHC5 323 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 TMPRSS11AQ6ZMR5 421 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 LINC00336Q6ZUF6 198 aa1.44□□□□□ -2.18
VPS13C-207ENST00000558919 VTCN1Q7Z7D3 282 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms