RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 PMS2P1A4D2B8 440 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 BLVRBP30043 206 aaPredicted RBP10.89□□□□□ -0.67
LDLR-205ENST00000557933 ZNF121P58317 390 aaPredicted RBP10.89□□□□□ -0.67
LDLR-205ENST00000557933 HSF1Q00613 529 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 FOXF1Q12946 379 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 LRRC18Q8N456 261 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 WWTR1Q9GZV5 400 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 SPACA1Q9HBV2 294 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 B3GALT1Q9Y5Z6 326 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 AHCTF1Q8WYP5 2266 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 A0A1B0GTQ1 180 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 OR5K4A6NMS3 321 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 C10orf142B7Z368 130 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 STMND1H3BQB6 276 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 SCAND1P57086 179 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 IGLV3-21P80748 117 aaPredicted RBP10.89□□□□□ -0.67
LDLR-205ENST00000557933 QRFPP83859 136 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 TLE1Q04724 770 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 MIDNQ504T8 468 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 C9orf152Q5JTZ5 239 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 C1orf100Q5SVJ3 147 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 TMEM244Q5VVB8 128 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 FDX2Q6P4F2 183 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 UQCC3Q6UW78 93 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 NUP54Q7Z3B4 507 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 OR8B12Q8NGG6 310 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 OR5D14Q8NGL3 314 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 HLA-CQ95604 372 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 MRPL24Q96A35 216 aaKnown RBP10.89□□□□□ -0.67
LDLR-205ENST00000557933 SGK3Q96BR1 496 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 KIRREL1Q96J84 757 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 SLC46A1Q96NT5 459 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 UQCC2Q9BRT2 126 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 SLCO5A1Q9H2Y9 848 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 GSN-AS1Q9NRJ2 163 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 KLHL13Q9P2N7 655 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 MMP24Q9Y5R2 645 aa10.89□□□□□ -0.67
LDLR-205ENST00000557933 KIR2DS5A0A0G2JLQ3 304 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 A0A0G2JNG1 304 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 MEGF11A6BM72 1044 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 DBX1A6NMT0 343 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 KIR2DS3K7RE56 304 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 CDC14BO60729 498 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 DXOO77932 396 aaKnown RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 MELTFP08582 738 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 SRFP11831 508 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 HIST1H1DP16402 221 aaKnown RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 FAHP16930 419 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 CRABP1P29762 137 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 FCGR2CP31995 323 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 PTGER4P35408 488 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 ARL4DP49703 201 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 POLR2HP52434 150 aaKnown RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 TMEM33P57088 247 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 OR1D5P58170 312 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 DCDP81605 110 aaKnown RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 KIR2DS5Q14953 304 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 PHLDA2Q53GA4 152 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 AADACL3Q5VUY0 350 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 SUMF1Q8NBK3 374 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 HIST1H2BAQ96A08 127 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 SLC5A7Q9GZV3 580 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 MIOXQ9UGB7 285 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 GPR132Q9UNW8 380 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 IGHV3-15A0A0B4J1V0 119 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 F8VVB4 439 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 F8VWA3 439 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 LY86O95711 162 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 PRH1P02810 166 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 IGKV3-11P04433 115 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 FSTP19883 344 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 IGFBP4P22692 258 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 OMGP23515 440 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 CAPZBP47756 277 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 CAV2P51636 162 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 LYPD6Q86Y78 171 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 ZNF283Q8N7M2 679 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 ZDHHC22Q8N966 263 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 DAZLQ92904 295 aaKnown RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 SLAMF9Q96A28 289 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 CDX2Q99626 313 aaPredicted RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 SEC11CQ9BY50 192 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 CARHSP1Q9Y2V2 147 aaKnown RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 G3V3Y1 287 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 SFT2D2O95562 160 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 DBHP09172 617 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 H2AFB1P0C5Y9 115 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 PNLIPP16233 465 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 SSBP1Q04837 148 aaKnown RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 PRSS54Q6PEW0 395 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 CPEB2Q7Z5Q1 589 aaKnown RBP10.88□□□□□ -0.67
LDLR-205ENST00000557933 OR5AS1Q8N127 324 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 ASB10Q8WXI3 467 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 CDC6Q99741 560 aa10.88□□□□□ -0.67
LDLR-205ENST00000557933 PUS1Q9Y606 427 aaKnown RBP eCLIP10.88□□□□□ -0.67
LDLR-205ENST00000557933 IGKV1-9A0A0C4DH69 117 aa10.87□□□□□ -0.67
LDLR-205ENST00000557933 FRG2CA6NGY1 282 aa10.87□□□□□ -0.67
LDLR-205ENST00000557933 DHRS7CA6NNS2 312 aa10.87□□□□□ -0.67
LDLR-205ENST00000557933 K7EPK0 472 aa10.87□□□□□ -0.67
LDLR-205ENST00000557933 TNFRSF10CO14798 259 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms