RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 KCTD8Q6ZWB6 473 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 MOB3CQ70IA8 216 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 WDR86Q86TI4 376 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 CELF2-AS1Q8N7Q2 184 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 ZNF676Q8N7Q3 588 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 PLPP7Q8NBV4 271 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 OR10AC1Q8NH08 325 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 GATAD2BQ8WXI9 593 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 ITPKCQ96DU7 683 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 TIMD4Q96H15 378 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 FN3KRPQ9HA64 309 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 PLEKHA1Q9HB21 404 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 GPR173Q9NS66 373 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 FKBP14Q9NWM8 211 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 C14orf119Q9NWQ9 140 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 SCN3BQ9NY72 215 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 MPC1Q9Y5U8 109 aa12.09□□□□□ -0.47
USP3-205ENST00000557884 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 TMEM178BH3BS89 294 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 CDK1P06493 297 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 IL2RGP31785 369 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 THBS2P35442 1172 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 CCR9P51686 369 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 CHN2P52757 468 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 CSNK2BP67870 215 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 MZT1Q08AG7 82 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 FAM201AQ5SY85 155 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 ZBTB37Q5TC79 503 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 TMEM244Q5VVB8 128 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 XAF1Q6GPH4 301 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 ZNF826PQ6ZT77 177 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 PEG10Q86TG7 708 aaKnown RBP12.08□□□□□ -0.48
USP3-205ENST00000557884 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
USP3-205ENST00000557884 OR11L1Q8NGX0 322 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 OR52N1Q8NH53 320 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 OR5P3Q8WZ94 311 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 RAB1CQ92928 201 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 RNF170Q96K19 258 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 HIST1H2AAQ96QV6 131 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 PDCD1LG2Q9BQ51 273 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 RTL8AQ9BWD3 113 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 PAK1IP1Q9NWT1 392 aaPredicted RBP12.08□□□□□ -0.48
USP3-205ENST00000557884 C1orf123Q9NWV4 160 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 NPTNQ9Y639 398 aa12.08□□□□□ -0.48
USP3-205ENST00000557884 ANK3Q12955 4377 aaKnown RBP12.08□□□□□ -0.48
USP3-205ENST00000557884 TRBV2A0A0J9YWF9 115 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 MYL12BO14950 172 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
USP3-205ENST00000557884 LY6G6DO95868 133 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 LALBAP00709 142 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 NRASP01111 189 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 IRF2P14316 349 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 TGM4P49221 684 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 GPM6AP51674 278 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 MRPL28Q13084 256 aaKnown RBP12.07□□□□□ -0.48
USP3-205ENST00000557884 CLVS2Q5SYC1 327 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 CLEC9AQ6UXN8 241 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 Q6ZSR3 168 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
USP3-205ENST00000557884 EGFL6Q8IUX8 553 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 ZFP41Q8N8Y5 198 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 C19orf18Q8NEA5 215 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 OR1M1Q8NGA1 313 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 CLDND2Q8NHS1 167 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 Q8TCH9 128 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 MYDGFQ969H8 173 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 ABCB9Q9NP78 766 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 BABAM2Q9NXR7 383 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 UBAP1Q9NZ09 502 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 ERVK-18Q9QC07 812 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 TPRKBQ9Y3C4 175 aa12.07□□□□□ -0.48
USP3-205ENST00000557884 SIRT4Q9Y6E7 314 aaPredicted RBP12.07□□□□□ -0.48
USP3-205ENST00000557884 TMEM212A6NML5 194 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 DHRS7CA6NNS2 312 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 ZNF732B4DXR9 585 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 IFNL4K9M1U5 179 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 ZFPL1O95159 310 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 ISG15P05161 165 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 CCDC159P0C7I6 412 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 CDH15P55291 814 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 BTG1P62324 171 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 ZNF154Q13106 437 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 CDK5R1Q15078 307 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 ZMYND11Q15326 602 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 CEACAM21Q3KPI0 293 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 BIVMQ86UB2 503 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 OR13C3Q8NGS6 347 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 OR5AK2Q8NH90 309 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 NPRL2Q8WTW4 380 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 RPL3LQ92901 407 aaKnown RBP12.06□□□□□ -0.48
USP3-205ENST00000557884 HPS1Q92902 700 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 ITFG2Q969R8 447 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 ERGIC1Q969X5 290 aa12.06□□□□□ -0.48
USP3-205ENST00000557884 FGGYQ96C11 551 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms