RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 GLIPR2Q9H4G4 154 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 FANCEQ9HB96 536 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ANKHQ9HCJ1 492 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 USE1Q9NZ43 259 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 CALML5Q9NZT1 146 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 P2RX2Q9UBL9 471 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ANGPT4Q9Y264 503 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 C15orf41Q9Y2V0 281 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 AP4S1Q9Y587 144 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 ZNF780BQ9Y6R6 833 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 INTS1Q8N201 2190 aaKnown RBP2.4□□□□□ -2.03
VRK1-207ENST00000557352 SPTBN4Q9H254 2564 aa2.4□□□□□ -2.03
VRK1-207ENST00000557352 SPEGQ15772 3267 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 DMDP11532 3685 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 URB1O60287 2271 aaKnown RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 FREM1Q5H8C1 2179 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 MED12Q93074 2177 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 IGKV3D-11A0A0A0MRZ8 115 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 IGHV5-51A0A0C4DH38 117 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 A0A1B0GX78 115 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C9JVG2 144 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 D6RAR5 112 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 SGK494L7N484 410 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 UPK1AO00322 258 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 HMGN4O00479 90 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 NVLO15381 856 aaKnown RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 CLOCKO15516 846 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 DENRO43583 198 aaKnown RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 CTNSO60931 367 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 GCM2O75603 506 aaPredicted RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 SERPINB7O75635 380 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 MMP23AO75900 390 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 LRATO95237 230 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C6orf47O95873 294 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 IGFBP1P08833 259 aaPredicted RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 TFPTP0C1Z6 253 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 ZNF806P0C7X5 589 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 GSTT2P0CG29 244 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 GSTT2BP0CG30 244 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 ATP6V1C1P21283 382 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 RPS4Y1P22090 263 aaKnown RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 CPN2P22792 545 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 MAPK3P27361 379 aaPredicted RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 PRDX2P32119 198 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 ACVR1BP36896 505 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 CCT3P49368 545 aaKnown RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 NCBP2P52298 156 aaKnown RBP eCLIP2.39□□□□□ -2.03
VRK1-207ENST00000557352 CRISP3P54108 245 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 ATXN3P54252 364 aaPredicted RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 GFERP55789 205 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 DSTNP60981 165 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 PPP1CAP62136 330 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 SELENOWP63302 87 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 BTN3A2P78410 334 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 CDK6Q00534 326 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 CHRNB3Q05901 458 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 PUDPQ08623 228 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 FUT7Q11130 342 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 IL18R1Q13478 541 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C1orf61Q13536 156 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 DEFB134Q4QY38 66 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 CYBRD1Q53TN4 286 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 FRMPD2BQ6IN97 320 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 UFSP1Q6NVU6 142 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 PLBD1Q6P4A8 553 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 LEG1Q6P5S2 330 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 DHRS4L2Q6PKH6 230 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 ZNF621Q6ZSS3 439 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 FAM92BQ6ZTR7 304 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C6orf120Q7Z4R8 191 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 SPATA24Q86W54 205 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 GRAMD2AQ8IUY3 354 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 ELMOD2Q8IZ81 293 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 CLECL1Q8IZS7 167 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 CA13Q8N1Q1 262 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C10orf111Q8N326 155 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 LINC00471Q8N535 108 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C2orf73Q8N5S3 287 aaPredicted RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 CDRT4Q8N9R6 151 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 TTC29Q8NA56 475 aaPredicted RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 PLPP5Q8NEB5 264 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 OR7G1Q8NGA0 311 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 OR8H1Q8NGG4 311 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 PYDC1Q8WXC3 89 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 GEMIN6Q8WXD5 167 aaKnown RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 LZICQ8WZA0 190 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 CIDECQ96AQ7 238 aaPredicted RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 AURKBQ96GD4 344 aaPredicted RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 PYURFQ96I23 114 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 SLC35G5Q96KT7 338 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C7orf34Q96L11 122 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 TRNT1Q96Q11 434 aaKnown RBP2.39□□□□□ -2.03
VRK1-207ENST00000557352 ZNF607Q96SK3 696 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 NRTNQ99748 197 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 DOHHQ9BU89 302 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 C9orf16Q9BUW7 83 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 OSBPL11Q9BXB4 747 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 GABARAPL1Q9H0R8 117 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 LRRN3Q9H3W5 708 aa2.39□□□□□ -2.03
VRK1-207ENST00000557352 Q9H521 79 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms