RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CDK1P06493 297 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 INHBBP09529 407 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 USF1P22415 310 aaPredicted RBP14.75□□□□□ -0.05
SHMT2-225ENST00000556798 THBS2P35442 1172 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 PMELP40967 661 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 GATA4P43694 442 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 CCR9P51686 369 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 TMEM33P57088 247 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 CSNK2BP67870 215 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 MRPL28Q13084 256 aaKnown RBP14.75□□□□□ -0.05
SHMT2-225ENST00000556798 Q6ZSR3 168 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 CELF2-AS1Q8N7Q2 184 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 ZNF676Q8N7Q3 588 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 SPERTQ8NA61 448 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 OR52N1Q8NH53 320 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 OR5P3Q8WZ94 311 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 PDCD1LG2Q9BQ51 273 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 PLEKHA1Q9HB21 404 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 GPR173Q9NS66 373 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 ERVK-18Q9QC07 812 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 WIPI2Q9Y4P8 454 aa14.75□□□□□ -0.05
SHMT2-225ENST00000556798 A6NLC8 198 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 CCDC159P0C7I6 412 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 TGM4P49221 684 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 SLC35A2P78381 396 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 HOXA4Q00056 320 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-225ENST00000556798 LOXL1Q08397 574 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-225ENST00000556798 DOC2BQ14184 412 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 ZBTB37Q5TC79 503 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 TMEM244Q5VVB8 128 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 PLCXD3Q63HM9 321 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 ZNF826PQ6ZT77 177 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 KCTD8Q6ZWB6 473 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 MOB3CQ70IA8 216 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 EGFL6Q8IUX8 553 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 ZFP41Q8N8Y5 198 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 OR51A4Q8NGJ6 313 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 MYDGFQ969H8 173 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 MICU1Q9BPX6 476 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 RTL8AQ9BWD3 113 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 Q9H521 79 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 C14orf119Q9NWQ9 140 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 UBAP1Q9NZ09 502 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 TPRKBQ9Y3C4 175 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 SIRT4Q9Y6E7 314 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-225ENST00000556798 ABCA1O95477 2261 aa14.74□□□□□ -0.05
SHMT2-225ENST00000556798 TRBV2A0A0J9YWF9 115 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 ISPDA4D126 451 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 ZFPL1O95159 310 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 ZNF205O95201 554 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 PTBP3O95758 552 aaKnown RBP14.73□□□□□ -0.05
SHMT2-225ENST00000556798 ISG15P05161 165 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 CRHBPP24387 322 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 IL2RGP31785 369 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 SLC3A1Q07837 685 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 MZT1Q08AG7 82 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 CDK5R1Q15078 307 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 FAM201AQ5SY85 155 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 ZNF485Q8NCK3 441 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 OR1M1Q8NGA1 313 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 OR5AK2Q8NH90 309 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 TIMD4Q96H15 378 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 RNF170Q96K19 258 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 FN3KRPQ9HA64 309 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 ABCB9Q9NP78 766 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 TRIM36Q9NQ86 728 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 C1orf123Q9NWV4 160 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 BABAM2Q9NXR7 383 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 HHLA2Q9UM44 414 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 NPTNQ9Y639 398 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 TLN2Q9Y4G6 2542 aa14.73□□□□□ -0.05
SHMT2-225ENST00000556798 TMEM212A6NML5 194 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 DHRS7CA6NNS2 312 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 TMEM178BH3BS89 294 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 DENRO43583 198 aaKnown RBP14.72□□□□□ -0.05
SHMT2-225ENST00000556798 NRASP01111 189 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 MT-ND2P03891 347 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 GPM6AP51674 278 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 CHN2P52757 468 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 WNT4P56705 351 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 ZNF154Q13106 437 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 CLVS2Q5SYC1 327 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 TMEM42Q69YG0 159 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 RPL22L1Q6P5R6 122 aaKnown RBP14.72□□□□□ -0.05
SHMT2-225ENST00000556798 KRT74Q7RTS7 529 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 NANOGP1Q8N7R0 232 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 OR11L1Q8NGX0 322 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 Q8TCH9 128 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 HAVCR2Q8TDQ0 301 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 RAB1CQ92928 201 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 ITFG2Q969R8 447 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 HIST1H2AAQ96QV6 131 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 COMMD4Q9H0A8 199 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 GSX1Q9H4S2 264 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-225ENST00000556798 DUSP21Q9H596 190 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 ERGIC3Q9Y282 383 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 CSPG4Q6UVK1 2322 aa14.72□□□□□ -0.05
SHMT2-225ENST00000556798 MALRD1Q5VYJ5 2156 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 PNMA8CA0A1B0GUJ8 204 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 hCG_1807616A0A1W2PRN6 198 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms