RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZNF721Q8TF20 911 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 BCL2L2Q92843 193 aaPredicted RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 MVB12AQ96EY5 273 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 C14orf79Q96F83 325 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SFRP2Q96HF1 295 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SLC30A2Q9BRI3 323 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 EGLN1Q9GZT9 426 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 PLK3Q9H4B4 646 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SS18L2Q9UHA2 77 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 ICAM5Q9UMF0 924 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SLC35A3Q9Y2D2 325 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TRDV1A0A1B0GX56 115 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 REM1O75628 298 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 RP2O75695 350 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 MPLP40238 635 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 LSM6P62312 80 aaKnown RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 HSD11B2P80365 405 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF85Q03923 595 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 EGR4Q05215 589 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 MZT1Q08AG7 82 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 VWA2Q5GFL6 755 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 LDLRAD2Q5SZI1 272 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 D2HGDHQ8N465 521 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 PXT1Q8NFP0 134 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 OR2G2Q8NGZ5 317 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 ZPLD1Q8TCW7 415 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 C1GALT1C1Q96EU7 318 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 KCTD7Q96MP8 289 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TP53RKQ96S44 253 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 DDOQ99489 341 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 S100A13Q99584 98 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 FAM110AQ9BQ89 295 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 PCGF1Q9BSM1 259 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 RSRP1Q9BUV0 290 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SNHG12Q9BXW3 62 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 OR14J1Q9UGF5 321 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SERTAD3Q9UJW9 196 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 PITPNC1Q9UKF7 332 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 SLC22A13Q9Y226 551 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TRAPPC4Q9Y296 219 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 MRPS17Q9Y2R5 130 aaKnown RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 FBXO7Q9Y3I1 522 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 TSSC4Q9Y5U2 329 aaPredicted RBP4.54□□□□□ -1.68
TMEM260-210ENST00000556422 ZDBF2Q9HCK1 2354 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 EML6Q6ZMW3 1958 aa4.54□□□□□ -1.68
TMEM260-210ENST00000556422 CACNA1CQ13936 2221 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 M0QZ24 198 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 GABRPO00591 440 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 TFP02787 698 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 DCNP07585 359 aaKnown RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 MRPL3P09001 348 aaKnown RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 HIST1H1CP16403 213 aaKnown RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 CALCRP30988 508 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ERVS71-1P61550 626 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 GNMTQ14749 295 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 FCN2Q15485 313 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 SPIN3Q5JUX0 258 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 CDPF1Q6NVV7 123 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 RNASEKQ6P5S7 137 aaKnown RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF550Q7Z398 422 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 WFDC8Q8IUA0 241 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 C9orf40Q8IXQ3 194 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ACBD7Q8N6N7 88 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF610Q8N9Z0 462 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 GATSQ8NAP1 163 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 OR5M3Q8NGP4 307 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 DYRK2Q92630 601 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 MESP1Q9BRJ9 268 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 C1orf198Q9H425 327 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 AUNIPQ9H7T9 357 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 TBC1D17Q9HA65 648 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ZFP64Q9NPA5 681 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 HAO2Q9NYQ3 351 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 OR10H1Q9Y4A9 318 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 A0A1B0GVT2 93 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF587BE7ETH6 402 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 BCAT2O15382 392 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 DUX1O43812 170 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 SC5DO75845 299 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 CHRM2P08172 466 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PLA2G5P39877 138 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 RAB1AP62820 205 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 GPR50Q13585 617 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 SGCBQ16585 318 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 SDR9C7Q8NEX9 313 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 RHBDD1Q8TEB9 315 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PINX1Q96BK5 328 aaKnown RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 ZNF501Q96CX3 271 aaPredicted RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PERPQ96FX8 193 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PGLYRP3Q96LB9 341 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 DUX5Q96PT3 197 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 NUDT22Q9BRQ3 303 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 NRSN2Q9GZP1 204 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 CHST5Q9GZS9 411 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 MED28Q9H204 178 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PRDM13Q9H4Q3 707 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 PLEK2Q9NYT0 353 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 SPENQ96T58 3664 aaKnown RBP4.53□□□□□ -1.68
TMEM260-210ENST00000556422 BDP1A6H8Y1 2624 aa4.53□□□□□ -1.68
TMEM260-210ENST00000556422 CCDC187A0A096LP49 1063 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms