RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ZNF546Q86UE3 836 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 DTX2Q86UW9 622 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 PRR22Q8IZ63 422 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 SPAG16Q8N0X2 631 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 MUC20Q8N307 709 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-241ENST00000556374 SLC22A24Q8N4F4 322 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF615Q8N8J6 731 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 EXD3Q8N9H8 876 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 LRRC75AQ8NAA5 344 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 CHST4Q8NCG5 386 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 OR1J4Q8NGS1 313 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 OR1J2Q8NGS2 313 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 OR10K1Q8NGX5 313 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 OR6K3Q8NGY3 331 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 OR6S1Q8NH40 331 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 LMX1AQ8TE12 382 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 GPX8Q8TED1 209 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ST8SIA4Q92187 359 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ARL11Q969Q4 196 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 MCHR2Q969V1 340 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 PTX4Q96A99 478 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 DDIT4LQ96D03 193 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ORAI1Q96D31 301 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 KTI12Q96EK9 354 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-241ENST00000556374 SLC41A2Q96JW4 573 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 LINC00052Q96N35 136 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 TSSK2Q96PF2 358 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 MAP3K3Q99759 626 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 GAL3ST1Q99999 423 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ARPC5LQ9BPX5 153 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF471Q9BX82 626 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-241ENST00000556374 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ULBP3Q9BZM4 244 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 B3GNT4Q9C0J1 378 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ALX4Q9H161 411 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-241ENST00000556374 NXF5Q9H1B4 397 aaKnown RBP3.89□□□□□ -1.79
ATXN3-241ENST00000556374 TXNIPQ9H3M7 391 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 PIGMQ9H3S5 423 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 C1orf198Q9H425 327 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 TMEM185BQ9H7F4 350 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 FAM60AQ9NP50 221 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 MYOZ1Q9NP98 299 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-241ENST00000556374 CUTCQ9NTM9 273 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ASF1BQ9NVP2 202 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 SLC39A1Q9NY26 324 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 SLC2A8Q9NY64 477 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 TAS2R3Q9NYW6 316 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 PIPOXQ9P0Z9 390 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 OR52A1Q9UKL2 312 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 RAB22AQ9UL26 194 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 MMP17Q9ULZ9 603 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 B9D1Q9UPM9 204 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 FARSAQ9Y285 508 aaKnown RBP3.89□□□□□ -1.79
ATXN3-241ENST00000556374 MEMO1Q9Y316 297 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 TMED7Q9Y3B3 224 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 LRP12Q9Y561 859 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 TMEM131Q92545 1883 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 HEATR5BQ9P2D3 2071 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 ATMQ13315 3056 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 COL12A1Q99715 3063 aa3.89□□□□□ -1.79
ATXN3-241ENST00000556374 MDC1Q14676 2089 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SPTBN1Q01082 2364 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SPTY2D1-AS1A0A0U1RR47 76 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 C5orf51A6NDU8 294 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 A8MXK9 166 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 PRR32B1ATL7 298 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 E9PLN8 166 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ATP6V1G2-DDX39BF2Z307 99 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 F5H0A9 414 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 G3V3Q6 166 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 M0QYG6 137 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SMAD9O15198 467 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 DUX1O43812 170 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 STK17BO94768 372 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SIX6O95475 246 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 APOC3P02656 99 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 RLN2P04090 185 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ISG15P05161 165 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 MELTFP08582 738 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 HCKP08631 526 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ITGA5P08648 1049 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 FGF2P09038 288 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 TMIGD3P0DMS9 266 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SLC25A4P12235 298 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 PTHLHP12272 177 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF250P15622 560 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 GABRG2P18507 467 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 RAB3AP20336 220 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 MALP21145 153 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 IL32P24001 234 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 CALCRP30988 508 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 MAGEB1P43366 347 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 CBX5P45973 191 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 FASLGP48023 281 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ARRB1P49407 418 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF41P51814 821 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 LUMP51884 338 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 PNLIPRP2P54317 469 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SLC37A1P57057 533 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 UBE2MP61081 183 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms