RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SHISA9B4DS77 424 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 B9A039 149 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 LMX1BO60663 402 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 OR4A8P0C604 315 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 PRF1P14222 555 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 COX6B1P14854 86 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 IGFBP2P18065 325 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ACKR3P25106 362 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 AZGP1P25311 298 aaKnown RBP7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ZNF93P35789 620 aaPredicted RBP7.9□□□□□ -1.14
ACTN1-218ENST00000556343 RBP2P50120 134 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 MTCP1P56278 107 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ERVS71-1P61550 626 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 GNG3P63215 75 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 SPOCK1Q08629 439 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 HNRNPA0Q13151 305 aaKnown RBP7.9□□□□□ -1.14
ACTN1-218ENST00000556343 DYNC1I2Q13409 638 aaKnown RBP7.9□□□□□ -1.14
ACTN1-218ENST00000556343 RAB11BQ15907 218 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 CNPY1Q3B7I2 92 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ZNF672Q499Z4 452 aaPredicted RBP7.9□□□□□ -1.14
ACTN1-218ENST00000556343 CEP78Q5JTW2 689 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 DDI2Q5TDH0 399 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 FOXB2Q5VYV0 432 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 TMEM42Q69YG0 159 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ZNF529Q6P280 563 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 LRRTM1Q86UE6 522 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ZNF573Q86YE8 665 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 OR5AS1Q8N127 324 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 JAGN1Q8N5M9 183 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ZNF671Q8TAW3 534 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 DYNC2LI1Q8TCX1 351 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 RNF170Q96K19 258 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 SORCS2Q96PQ0 1159 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 DCUN1D5Q9BTE7 237 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 CXXC4Q9H2H0 198 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 PPIL3Q9H2H8 161 aaKnown RBP7.9□□□□□ -1.14
ACTN1-218ENST00000556343 MMP27Q9H306 513 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 C14orf119Q9NWQ9 140 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 PTTG2Q9NZH5 202 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ABRACLQ9P1F3 81 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 TAAR3PQ9P1P4 343 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 GHRLQ9UBU3 117 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ADAM30Q9UKF2 790 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 ZDHHC8Q9ULC8 765 aa7.9□□□□□ -1.14
ACTN1-218ENST00000556343 CHD6Q8TD26 2715 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 SPTBN1Q01082 2364 aaKnown RBP7.89□□□□□ -1.15
ACTN1-218ENST00000556343 IGLV3-9A0A075B6K5 115 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 TRAV8-7A0A075B6U6 113 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 FAM230AA0A1W2PPH8 454 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 OR5B21A6NL26 309 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 TMEM210A6NLX4 147 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 IFITM5A6NNB3 132 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 A6NNC1 897 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 DEFB108AA8MXU0 73 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 E7EQL1 145 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 PYCARD-AS1I3L0S3 204 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 AIPO00170 330 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 UBBP0CG47 229 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 CA6P23280 308 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 S100A5P33763 92 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 TGFBR1P36897 503 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 MPV17P39210 176 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 SCAND1P57086 179 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 RIN1Q13671 783 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 GPR176Q14439 515 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 KISS1Q15726 138 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 UBE2V2Q15819 145 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 ADIPOQQ15848 244 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 FAM189A2Q15884 450 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 ZNF404Q494X3 552 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 IDNKQ5T6J7 187 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 AGAP6Q5VW22 663 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 SFXN4Q6P4A7 337 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 BHLHE23Q8NDY6 225 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 OR6M1Q8NGM8 313 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 SYT3Q9BQG1 590 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 SLC30A2Q9BRI3 323 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 TMEM204Q9BSN7 226 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 ADAT1Q9BUB4 502 aaKnown RBP7.89□□□□□ -1.15
ACTN1-218ENST00000556343 MS4A5Q9H3V2 200 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 METTL17Q9H7H0 456 aaPredicted RBP7.89□□□□□ -1.15
ACTN1-218ENST00000556343 STEAP1Q9UHE8 339 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 DAPK2Q9UIK4 370 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 FZR1Q9UM11 496 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 A3GALT2U3KPV4 340 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 PMF1-BGLAPU3KQ54 211 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 MYO18BQ8IUG5 2567 aa7.89□□□□□ -1.15
ACTN1-218ENST00000556343 ANKHD1Q8IWZ3 2542 aaKnown RBP7.88□□□□□ -1.15
ACTN1-218ENST00000556343 A0A075B6Q4 140 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 ZNF732B4DXR9 585 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 C19orf84I3L1E1 186 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 SLC17A2O00624 439 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 ZNF780AO75290 641 aaPredicted RBP7.88□□□□□ -1.15
ACTN1-218ENST00000556343 CLEC2LP0C7M8 214 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 CALCBP10092 127 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 HTR2CP28335 458 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 SRP9P49458 86 aaKnown RBP7.88□□□□□ -1.15
ACTN1-218ENST00000556343 SNRPD2P62316 118 aaKnown RBP7.88□□□□□ -1.15
ACTN1-218ENST00000556343 TNK1Q13470 666 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 EFNB3Q15768 340 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms