RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TBX5Q99593 518 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 SLC29A1Q99808 456 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 APOL4Q9BPW4 351 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 MICU1Q9BPX6 476 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 RTL8AQ9BWD3 113 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 TMPRSS13Q9BYE2 586 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 TLNRD1Q9H1K6 362 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 TRIM36Q9NQ86 728 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 GPR84Q9NQS5 396 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 MIOXQ9UGB7 285 aa9.65□□□□□ -0.86
SLIRP-205ENST00000556310 DNHD1Q96M86 4753 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 A0A1W2PQL4 384 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-205ENST00000556310 TMEM210A6NLX4 147 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF850A8MQ14 1090 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 LGALS8O00214 317 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 MAGEB4O15481 346 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ENTPD6O75354 484 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 BAG2O95816 211 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 TTRP02766 147 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 CD80P33681 288 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ATP6V1E1P36543 226 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 MTNR1AP48039 350 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ACTC1P68032 377 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ACTA1P68133 377 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 SCGB2A2Q13296 93 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF684Q5T5D7 378 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ZBTB37Q5TC79 503 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 PLEKHG7Q6ZR37 379 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF826PQ6ZT77 177 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 ZDHHC23Q8IYP9 409 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 GCSAMQ8N6F7 178 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 SEMA6DQ8NFY4 1073 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 OR1M1Q8NGA1 313 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 OR8B3Q8NGG8 313 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 OR51E1Q8TCB6 317 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 HPSE2Q8WWQ2 592 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 OR5P3Q8WZ94 311 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 UBE2FQ969M7 185 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 FAM71F1Q96KD3 344 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-205ENST00000556310 RDH12Q96NR8 316 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 OR8B2Q96RD0 313 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 SSBP3Q9BWW4 388 aaPredicted RBP9.64□□□□□ -0.87
SLIRP-205ENST00000556310 PPP1R3EQ9H7J1 279 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 RNPEPL1Q9HAU8 725 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 OR5V1Q9UGF6 321 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 OR52A1Q9UKL2 312 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 GTF2A1LQ9UNN4 478 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 GMPPBQ9Y5P6 360 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 SNX5Q9Y5X3 404 aa9.64□□□□□ -0.87
SLIRP-205ENST00000556310 LOC105371242A0A075B767 164 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 TRAV38-1A0A0B4J264 116 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 OOEPA6NGQ2 149 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 METTL15A6NJ78 407 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 SNTNA6NMZ2 147 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 PHF1O43189 567 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-205ENST00000556310 MPZL2O60487 215 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 SULT1C4O75897 302 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 DHRS3O75911 302 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 LHBP01229 141 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 ZNF12P17014 697 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 GABRB1P18505 474 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 CFHR2P36980 270 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 PSMB10P40306 273 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 PITPNBP48739 271 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 GNB2P62879 340 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 CSNK2BP67870 215 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 HOXA4Q00056 320 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-205ENST00000556310 RIPPLY1Q0D2K3 151 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 LIPNQ5VXI9 398 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 WDR82Q6UXN9 313 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 C1orf229Q6ZS94 237 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-205ENST00000556310 FAM220AQ7Z4H9 259 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 C1QL2Q7Z5L3 287 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 THAP5Q7Z6K1 395 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 C11orf53Q8IXP5 236 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 ELMOD2Q8IZ81 293 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 YIPF7Q8N8F6 280 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 BOLLQ8N9W6 283 aaKnown RBP9.63□□□□□ -0.87
SLIRP-205ENST00000556310 C19orf18Q8NEA5 215 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 DEFB108BQ8NET1 73 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 LRRC29Q8WV35 223 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 PIGCQ92535 297 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 RNFT2Q96EX2 444 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 METTL17Q9H7H0 456 aaPredicted RBP9.63□□□□□ -0.87
SLIRP-205ENST00000556310 MMP26Q9NRE1 261 aa9.63□□□□□ -0.87
SLIRP-205ENST00000556310 STAB1Q9NY15 2570 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 LOC100130705A0A1B0GUX0 176 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 OR5B21A6NL26 309 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 DHRS7CA6NNS2 312 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 SRRM5B3KS81 715 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 TRAPPC2LH3BP13 241 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 J3QRE1 110 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 SLC16A6O15403 523 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 NDUFA2O43678 99 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 MTRF1O75570 445 aaKnown RBP9.62□□□□□ -0.87
SLIRP-205ENST00000556310 RPP14O95059 124 aaKnown RBP9.62□□□□□ -0.87
SLIRP-205ENST00000556310 FAHP16930 419 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 EGR1P18146 543 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 CCL1P22362 96 aa9.62□□□□□ -0.87
SLIRP-205ENST00000556310 ISL1P61371 349 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms