RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 OR5P3Q8WZ94 311 aa10.46□□□□□ -0.73
SNX6-207ENST00000556303 DUS3LQ96G46 650 aaKnown RBP10.46□□□□□ -0.73
SNX6-207ENST00000556303 ZNF48Q96MX3 618 aaPredicted RBP10.46□□□□□ -0.73
SNX6-207ENST00000556303 HIST1H2AAQ96QV6 131 aa10.46□□□□□ -0.73
SNX6-207ENST00000556303 BRD7Q9NPI1 651 aa10.46□□□□□ -0.73
SNX6-207ENST00000556303 TRAV40A0A0B4J280 105 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 ZNF816-ZNF321PA0A0X1KG74 233 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 TMEM269A0A1B0GVZ9 245 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 G3V2T6 193 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 CDIPTO14735 213 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 TOX4O94842 621 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 MMP9P14780 707 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 ACKR3P25106 362 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 FASP25445 335 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 SLC9A3R2Q15599 337 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 GFOD2Q3B7J2 385 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 ZNF829Q3KNS6 432 aaPredicted RBP10.45□□□□□ -0.74
SNX6-207ENST00000556303 NXNL2Q5VZ03 156 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 MEPCEQ7L2J0 689 aaKnown RBP10.45□□□□□ -0.74
SNX6-207ENST00000556303 WDR86Q86TI4 376 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 ZDHHC13Q8IUH4 622 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 ZDHHC23Q8IYP9 409 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 TMEM86BQ8N661 226 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 OR8B12Q8NGG6 310 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 FAM71F1Q96KD3 344 aaPredicted RBP10.45□□□□□ -0.74
SNX6-207ENST00000556303 LYZL4Q96KX0 146 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 C1orf147Q96MC9 270 aaPredicted RBP10.45□□□□□ -0.74
SNX6-207ENST00000556303 WDFY2Q96P53 400 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 OSBPL10Q9BXB5 764 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 CNTD2Q9H8S5 307 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 KRT84Q9NSB2 600 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 FAM206AQ9NX38 181 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 HAO2Q9NYQ3 351 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 H2AFY2Q9P0M6 372 aaPredicted RBP10.45□□□□□ -0.74
SNX6-207ENST00000556303 AP4S1Q9Y587 144 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 KPTNQ9Y664 436 aa10.45□□□□□ -0.74
SNX6-207ENST00000556303 CCDC182A6NF36 153 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 POM121CA8CG34 1229 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 ZNF850A8MQ14 1090 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 DVL1O14640 695 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 IGLV3-1P01715 115 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 EGR1P18146 543 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 TGM4P49221 684 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 RIDAP52758 137 aaKnown RBP10.44□□□□□ -0.74
SNX6-207ENST00000556303 IL13RA1P78552 427 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 RIPPLY1Q0D2K3 151 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 PRDX4Q13162 271 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 CEACAM21Q3KPI0 293 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 SLX4IPQ5VYV7 408 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 KDM4DQ6B0I6 523 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 C16orf87Q6PH81 154 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 BTN2A1Q7KYR7 527 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 LY6G5BQ8NDX9 201 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 OR5A2Q8NGI9 324 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 FAM81AQ8TBF8 368 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 NPRL2Q8WTW4 380 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 GATAD2BQ8WXI9 593 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 PIGCQ92535 297 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 MED30Q96HR3 178 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 RNF170Q96K19 258 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 RAB3IPQ96QF0 476 aaPredicted RBP10.44□□□□□ -0.74
SNX6-207ENST00000556303 OR8B4Q96RC9 309 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 CNN2Q99439 309 aaKnown RBP10.44□□□□□ -0.74
SNX6-207ENST00000556303 PKP2Q99959 881 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 ZNF747Q9BV97 191 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 GABARAPL1Q9H0R8 117 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 MOB1AQ9H8S9 216 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 SMURF1Q9HCE7 757 aa10.44□□□□□ -0.74
SNX6-207ENST00000556303 NUFIP1Q9UHK0 495 aaKnown RBP10.44□□□□□ -0.74
SNX6-207ENST00000556303 RPUSD1Q9UJJ7 312 aaKnown RBP10.44□□□□□ -0.74
SNX6-207ENST00000556303 A0A1B0GUS0 222 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 OR5B21A6NL26 309 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 DHRS7CA6NNS2 312 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 ZAR1LA6NP61 321 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.43□□□□□ -0.74
SNX6-207ENST00000556303 PRKYO43930 277 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 MTRF1O75570 445 aaKnown RBP10.43□□□□□ -0.74
SNX6-207ENST00000556303 RPL15P61313 204 aaKnown RBP10.43□□□□□ -0.74
SNX6-207ENST00000556303 GNG3P63215 75 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 CSNK2BP67870 215 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 EGR3Q06889 387 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 CDONQ4KMG0 1287 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 LRRC10Q5BKY1 277 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 WDR38Q5JTN6 314 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 AADACL4Q5VUY2 407 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 C1orf146Q5VVC0 180 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 C12orf73Q69YU5 71 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 METAP1DQ6UB28 335 aaPredicted RBP10.43□□□□□ -0.74
SNX6-207ENST00000556303 SHISA2Q6UWI4 295 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 Q6YL49 198 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 GID4Q8IVV7 300 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 KIR3DL3Q8N743 410 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 SCCPDHQ8NBX0 429 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 C8orf46Q8TAG6 207 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 ZNF671Q8TAW3 534 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 TMEM163Q8TC26 289 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 ZDHHC16Q969W1 377 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 PCGF1Q9BSM1 259 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 PBOV1Q9GZY1 135 aa10.43□□□□□ -0.74
SNX6-207ENST00000556303 SIRPDQ9H106 197 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms