RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CPSF4LA6NMK7 179 aaKnown RBP5.5□□□□□ -1.53
ATXN3-236ENST00000556220 M0R3H8 397 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DLGAP1O14490 977 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 SYNGR1O43759 233 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 SERPINB7O75635 380 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 OR7A10O76100 309 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 LHBP01229 141 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 SEMG1P04279 462 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DUX4L2P0CJ85 424 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DUX4L3P0CJ86 424 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DUX4L4P0CJ87 422 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DUX4L5P0CJ88 424 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DUX4L6P0CJ89 424 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DUX4L7P0CJ90 424 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 PAX6P26367 422 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 ACTR3P61158 418 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 CNN3Q15417 329 aaKnown RBP5.5□□□□□ -1.53
ATXN3-236ENST00000556220 NPTX1Q15818 432 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 CCDC92Q53HC0 331 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-236ENST00000556220 TCTEX1D4Q5JR98 221 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 ENTPD8Q5MY95 495 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 GCNT6Q5T4J0 391 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 TEX36Q5VZQ5 186 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 HCP5Q6MZN7 132 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DUX4L9Q6RFH8 374 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-236ENST00000556220 UNQ9370/PRO34162Q6UXP9 181 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 TMEM179BQ7Z7N9 219 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DHDDSQ86SQ9 333 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 THNSL2Q86YJ6 484 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 C10orf67Q8IYJ2 551 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 ADGRG5Q8IZF4 528 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 GCSAMQ8N6F7 178 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 OR6T1Q8NGN1 323 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 ADAMTS16Q8TE57 1224 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 TSPEARQ8WU66 669 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 CCDC124Q96CT7 223 aaKnown RBP5.5□□□□□ -1.53
ATXN3-236ENST00000556220 ITCHQ96J02 903 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 CCL13Q99616 98 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 MCRIP2Q9BUT9 160 aaKnown RBP5.5□□□□□ -1.53
ATXN3-236ENST00000556220 HCAR1Q9BXC0 346 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 PRSS22Q9GZN4 317 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 SLC22A4Q9H015 551 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 MUC13Q9H3R2 512 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 METTL8Q9H825 291 aaKnown RBP5.5□□□□□ -1.53
ATXN3-236ENST00000556220 RMND5AQ9H871 391 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 WDR76Q9H967 626 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 EMC7Q9NPA0 242 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 DUX4Q9UBX2 424 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 SLC7A7Q9UM01 511 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 PRPF19Q9UMS4 504 aaKnown RBP5.5□□□□□ -1.53
ATXN3-236ENST00000556220 ANGPT4Q9Y264 503 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 GMEB1Q9Y692 573 aa5.5□□□□□ -1.53
ATXN3-236ENST00000556220 KMT2AQ03164 3969 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 DNAH10Q8IVF4 4471 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 IGHV3OR15-7A0A075B7D8 119 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 TRAPPC13A5PLN9 417 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 H0YHG0 523 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 M0R1W7 72 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 F2RL2O00254 374 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 ARPC2O15144 300 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 GYG2O15488 501 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 NDUFB3O43676 98 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 RAMP3O60896 148 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 IGF2P01344 180 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 MT-ND1P03886 318 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 CCDC159P0C7I6 412 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 HSD17B1P14061 328 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 PAICSP22234 425 aaKnown RBP5.49□□□□□ -1.53
ATXN3-236ENST00000556220 CHATP28329 748 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 VDAC2P45880 294 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-236ENST00000556220 RPL27P61353 136 aaKnown RBP5.49□□□□□ -1.53
ATXN3-236ENST00000556220 BLCAPP62952 87 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 LIPEQ05469 1076 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 AQP6Q13520 282 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 RIPK1Q13546 671 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 OR8G1Q15617 311 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 MICBQ29980 383 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 COQ5Q5HYK3 327 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 COLCA1Q6ZS62 124 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 ZNF826PQ6ZT77 177 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 MSANTD1Q6ZTZ1 278 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 SLC36A1Q7Z2H8 476 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 RBM45Q8IUH3 476 aaKnown RBP5.49□□□□□ -1.53
ATXN3-236ENST00000556220 ARMC8Q8IUR7 673 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 SMYD1Q8NB12 490 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 LIPHQ8WWY8 451 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 PYDC1Q8WXC3 89 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 ACOT11Q8WXI4 607 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-236ENST00000556220 TFAP2CQ92754 450 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 SGTBQ96EQ0 304 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 C16orf92Q96LL3 132 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 PRSS27Q9BQR3 290 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 KAT8Q9H7Z6 458 aaKnown RBP5.49□□□□□ -1.53
ATXN3-236ENST00000556220 C1orf123Q9NWV4 160 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 ATPIF1Q9UII2 106 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 NOP16Q9Y3C1 178 aaKnown RBP5.49□□□□□ -1.53
ATXN3-236ENST00000556220 KIAA1109Q2LD37 5005 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 ALMS1Q8TCU4 4167 aa5.49□□□□□ -1.53
ATXN3-236ENST00000556220 A6NDX4 124 aa5.48□□□□□ -1.53
ATXN3-236ENST00000556220 NKX6-3A6NJ46 265 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms