RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 RGS5O15539 181 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 SIAH2O43255 324 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 TPD52L2O43399 206 aaKnown RBP8.74□□□□□ -1.01
SRP54-208ENST00000555557 RAC2P15153 192 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 CA6P23280 308 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 AZGP1P25311 298 aaKnown RBP8.74□□□□□ -1.01
SRP54-208ENST00000555557 PRDX4Q13162 271 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 P2RY14Q15391 338 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 ZNF718Q3SXZ3 478 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 GLT8D1Q68CQ7 371 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 THOC7Q6I9Y2 204 aaKnown RBP8.74□□□□□ -1.01
SRP54-208ENST00000555557 RGS7BPQ6MZT1 257 aaPredicted RBP8.74□□□□□ -1.01
SRP54-208ENST00000555557 UNQ6126/PRO20091Q6UXV3 157 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 UTS2BQ765I0 119 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 LYPD6Q86Y78 171 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 OR5H6Q8NGV6 325 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 UBASH3BQ8TF42 649 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 MMP27Q9H306 513 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 KCNK15Q9H427 330 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 OPA3Q9H6K4 179 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 CNTD2Q9H8S5 307 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 LIN7BQ9HAP6 207 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 SMURF1Q9HCE7 757 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 ABCB9Q9NP78 766 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 KCNN3Q9UGI6 736 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 DUSP13Q9UII6 198 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 A0A075B6Q4 140 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.74□□□□□ -1.01
SRP54-208ENST00000555557 MEGF11A6BM72 1044 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 GCH1P30793 250 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 GLRXP35754 106 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 ZNF93P35789 620 aaPredicted RBP8.74□□□□□ -1.01
SRP54-208ENST00000555557 MADCAM1Q13477 382 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 NCMAPQ5T1S8 102 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 PLCXD3Q63HM9 321 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 CRIP3Q6Q6R5 217 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 SSX8Q7RTT4 187 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 LAX1Q8IWV1 398 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 CSNK2A3Q8NEV1 391 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 OR4D6Q8NGJ1 314 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 OR5D18Q8NGL1 313 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 OR6Q1Q8NGQ2 317 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 ZNF671Q8TAW3 534 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 TMEM171Q8WVE6 324 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 AP3S1Q92572 193 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 FGF23Q9GZV9 251 aaPredicted RBP8.74□□□□□ -1.01
SRP54-208ENST00000555557 NGBQ9NPG2 151 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 MYEF2Q9P2K5 600 aaKnown RBP8.74□□□□□ -1.01
SRP54-208ENST00000555557 SPEF1Q9Y4P9 236 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 ATP23Q9Y6H3 246 aa8.74□□□□□ -1.01
SRP54-208ENST00000555557 ROS1P08922 2347 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 IGKV1-27A0A075B6S5 117 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 ANKRD30BLA7E2S9 258 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 TIMM8AO60220 97 aaPredicted RBP8.73□□□□□ -1.01
SRP54-208ENST00000555557 HPGDSO60760 199 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 PLAUP00749 431 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 CST4P01036 141 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 PRF1P14222 555 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 HTR2CP28335 458 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 OR3A4PP47883 348 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 MTCP1P56278 107 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 PLA2G7Q13093 441 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 KISS1Q15726 138 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 MBNL2Q5VZF2 373 aaKnown RBP8.73□□□□□ -1.01
SRP54-208ENST00000555557 CENPSQ8N2Z9 138 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 NKAIN3Q8N8D7 197 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 DTX3Q8N9I9 347 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 OR51D1Q8NGF3 324 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 SSC4DQ8WTU2 575 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 CHPT1Q8WUD6 406 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 HPSE2Q8WWQ2 592 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 NEUROG1Q92886 237 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 GPER1Q99527 375 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 SYT3Q9BQG1 590 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 NEURL2Q9BR09 285 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 MIXL1Q9H2W2 232 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 ESRP2Q9H6T0 727 aaKnown RBP8.73□□□□□ -1.01
SRP54-208ENST00000555557 CA10Q9NS85 328 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 STEAP1Q9UHE8 339 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 PURGQ9UJV8 347 aaKnown RBP8.73□□□□□ -1.01
SRP54-208ENST00000555557 POU2F3Q9UKI9 436 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 COL12A1Q99715 3063 aa8.73□□□□□ -1.01
SRP54-208ENST00000555557 IGHV3-64DA0A0J9YX35 117 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 IQCF6A8MYZ5 107 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 H0YL77 283 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 SLC17A2O00624 439 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 ALX3O95076 343 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 PLATP00750 562 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 ERCC1P07992 297 aaPredicted RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 GSTT2P0CG29 244 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 GSTT2BP0CG30 244 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 CD37P11049 281 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 MMP15P51511 669 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 SRSF1Q07955 248 aaKnown RBP eCLIP8.72□□□□□ -1.01
SRP54-208ENST00000555557 RAB11BQ15907 218 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 ZBTB37Q5TC79 503 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 FAM166AQ6J272 317 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 ANGPTL5Q86XS5 388 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms