RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 RAB3AP20336 220 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 RAD52P43351 418 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 PLA2G7Q13093 441 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 MADCAM1Q13477 382 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 ZNF404Q494X3 552 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 SPRNQ5BIV9 151 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 DDI2Q5TDH0 399 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 TPRA1Q86W33 373 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 OR5D18Q8NGL1 313 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 OR5L1Q8NGL2 311 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 OR5D14Q8NGL3 314 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
TDP1-211ENST00000555178 MRPL37Q9BZE1 423 aaKnown RBP9.2□□□□□ -0.94
TDP1-211ENST00000555178 SLITRK2Q9H156 845 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 V9GY05 133 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 IGKV1-27A0A075B6S5 117 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 ZNF816-ZNF321PA0A0X1KG74 233 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 NOTOA8MTQ0 251 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 CLPXO76031 633 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 ZNF12P17014 697 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 BDKRB2P30411 391 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 SOX6P35712 828 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 P2RY14Q15391 338 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 ADIPOQQ15848 244 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 TMEM42Q69YG0 159 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 Q6ZR03 302 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 LYPD6Q86Y78 171 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 LAX1Q8IWV1 398 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 ZCCHC24Q8N2G6 241 aaKnown RBP9.2□□□□□ -0.94
TDP1-211ENST00000555178 JAGN1Q8N5M9 183 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 OR5H6Q8NGV6 325 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 TBC1D15Q8TC07 691 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 HPSE2Q8WWQ2 592 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 THRSPQ92748 146 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 TMEM204Q9BSN7 226 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 NXF2Q9GZY0 626 aaKnown RBP9.2□□□□□ -0.94
TDP1-211ENST00000555178 ESRP2Q9H6T0 727 aaKnown RBP9.2□□□□□ -0.94
TDP1-211ENST00000555178 MOV10Q9HCE1 1003 aaKnown RBP9.2□□□□□ -0.94
TDP1-211ENST00000555178 SMURF1Q9HCE7 757 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 CA10Q9NS85 328 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 COMMD3Q9UBI1 195 aa9.2□□□□□ -0.94
TDP1-211ENST00000555178 KLF2Q9Y5W3 355 aaPredicted RBP9.2□□□□□ -0.94
TDP1-211ENST00000555178 USF3Q68DE3 2245 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 IGHV3-64DA0A0J9YX35 117 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 IFITM5A6NNB3 132 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 DHRS7CA6NNS2 312 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 H0YL77 283 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 J3QW42 95 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 NRASP01111 189 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 CD3EP07766 207 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 HCKP08631 526 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 SELEP16581 610 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 CA6P23280 308 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 CFL1P23528 166 aaKnown RBP9.19□□□□□ -0.94
TDP1-211ENST00000555178 AZGP1P25311 298 aaKnown RBP9.19□□□□□ -0.94
TDP1-211ENST00000555178 PRDX4Q13162 271 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 BEX5Q5H9J7 111 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 PLCXD3Q63HM9 321 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 RGS7BPQ6MZT1 257 aaPredicted RBP9.19□□□□□ -0.94
TDP1-211ENST00000555178 MOB3CQ70IA8 216 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 OR4D6Q8NGJ1 314 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 PP6455Q8WZ26 134 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 PSMG3-AS1Q96PY0 264 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 BCL2L14Q9BZR8 327 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 LIN7BQ9HAP6 207 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 TMEM138Q9NPI0 162 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 DUSP13Q9UII6 198 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 CSMD1Q96PZ7 3565 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 FAM230AA0A1W2PPH8 454 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 AIPO00170 330 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 PDCD5O14737 125 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 PLATP00750 562 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 OR3A4PP47883 348 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 MMP15P51511 669 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 HOXA4Q00056 320 aaPredicted RBP9.19□□□□□ -0.94
TDP1-211ENST00000555178 CLVS2Q5SYC1 327 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 METAP1DQ6UB28 335 aaPredicted RBP9.19□□□□□ -0.94
TDP1-211ENST00000555178 ZNF295-AS1Q8N0V1 137 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 OR10AD1Q8NGE0 317 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 LGALS14Q8TCE9 139 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 HAVCR1Q96D42 359 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 MIXL1Q9H2W2 232 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 CNTD2Q9H8S5 307 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 PLGRKTQ9HBL7 147 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 MSL2Q9HCI7 577 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 KCNN3Q9UGI6 736 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 RNF115Q9Y4L5 304 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 ITPR2Q14571 2701 aa9.19□□□□□ -0.94
TDP1-211ENST00000555178 A6NNC1 897 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 RGS5O15539 181 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 OCMP0CE72 109 aaPredicted RBP9.18□□□□□ -0.94
TDP1-211ENST00000555178 RAC2P15153 192 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 GLRXP35754 106 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 MST1LQ2TV78 715 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 UTS2BQ765I0 119 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 BATF2Q8N1L9 274 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 DTX3Q8N9I9 347 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 FAM222BQ8WU58 562 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 NRGNQ92686 78 aa9.18□□□□□ -0.94
TDP1-211ENST00000555178 OPA3Q9H6K4 179 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms