RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	NUDCD3	Q8IVD9	361 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	C10orf111	Q8N326	155 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	SVOPL	Q8N434	492 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	C17orf78	Q8N4C9	275 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	FAM89B	Q8N5H3	189 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	NATD1	Q8N6N6	113 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR5AP2	Q8NGF4	316 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	GGH	Q92820	318 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLCO4A1	Q96BD0	722 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	TESC	Q96BS2	214 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZHX1-C8orf76	Q96EF9	292 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	CCDC115	Q96NT0	180 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	TRNT1	Q96Q11	434 aa	Known RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC38A2	Q96QD8	506 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	VGLL1	Q99990	258 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	WFDC6	Q9BQY6	131 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	RIMS4	Q9H426	269 aa	Predicted RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	RNF121	Q9H920	327 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	MARCO	Q9UEW3	520 aa	Predicted RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	ELF5	Q9UKW6	265 aa	Predicted RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC9A8	Q9Y2E8	581 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	MALRD1	Q5VYJ5	2156 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	NUP214	P35658	2090 aa	Predicted RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	IGKV1D-42	A0A075B6H8	117 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	LOC390937	A0A1W2PQ73	354 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	SH3PXD2B	A1X283	911 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956		E9PBE3	544 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956		H7C423	109 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	SDHD	O14521	159 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	EIF1B	O60739	113 aa	Known RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	GMNN	O75496	209 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	VENTX	O95231	258 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	HPR	P00739	348 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	IGKV3-15	P01624	115 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	SERPINE1	P05121	402 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	TACSTD2	P09758	323 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	CSF3	P09919	207 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	TFPT	P0C1Z6	253 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	FUT1	P19526	365 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	TCN1	P20061	433 aa	Predicted RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	BGN	P21810	368 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	COL8A2	P25067	703 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	GIF	P27352	417 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	HTR2A	P28223	471 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	S100A3	P33764	101 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	CHI3L1	P36222	383 aa	Predicted RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	SERPINB5	P36952	375 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	RBMX	P38159	391 aa	Known RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	MDH1	P40925	334 aa	Known RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC1A6	P48664	564 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	RPL14	P50914	215 aa	Known RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	IDH3G	P51553	393 aa	Predicted RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	AQP5	P55064	265 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	TGFBR3	Q03167	851 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC3A1	Q07837	685 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	BST1	Q10588	318 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	GK2	Q14410	553 aa	Predicted RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	LCN1P1	Q5VSP4	162 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	ANXA8L1	Q5VT79	327 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	C1orf140	Q5VVS0	124 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	NIPAL3	Q6P499	406 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF621	Q6ZSS3	439 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	SSX8	Q7RTT4	187 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	MDP1	Q86V88	176 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	LRP11	Q86VZ4	500 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	TMEM123	Q8N131	208 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	CADM2	Q8N3J6	435 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR52P1P	Q8NH57	321 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR4A16	Q8NH70	328 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	AEN	Q8WTP8	325 aa	Known RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	MAL2	Q969L2	176 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	RFT1	Q96AA3	541 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	DDIT4L	Q96D03	193 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF75A	Q96N20	296 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR52E6	Q96RD3	313 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	PANX1	Q96RD7	426 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	MCRIP2	Q9BUT9	160 aa	Known RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	CLEC7A	Q9BXN2	247 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	TRIM15	Q9C019	465 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	TPK1	Q9H3S4	243 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	MTHFD2L	Q9H903	347 aa	Predicted RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	MEAF6	Q9HAF1	191 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	AIG1	Q9NVV5	245 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	MYEF2	Q9P2K5	600 aa	Known RBP	4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	BTNL2	Q9UIR0	455 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	SH3GLB1	Q9Y371	365 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	DSPP	Q9NZW4	1301 aa		4.19	□□□□□ -1.74
PSMC6-208	ENST00000554956	IGKV3D-20	A0A0C4DH25	116 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR6C65	A6NJZ3	312 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956		A8MVM7	634 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	LRRN3	E7EW58	273 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	RPL36A-HNRNPH2	H7BZ11	118 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	hCG_2039718	K7EN88	272 aa		4.18	□□□□□ -1.74
PSMC6-208	ENST00000554956	NDUFS8	O00217	210 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms