RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 SNRNP200O75643 2136 aaKnown RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 TEX15Q9BXT5 2789 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 PIEZO2Q9H5I5 2752 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 GLYATL1P3A0A0U1RQE8 302 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 KBTBD11-OT1A0A1B0GTJ5 212 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 A0A1W2PPK0 400 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 RNF222A6NCQ9 220 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 CXorf65A6NEN9 183 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 DHRS7CA6NNS2 312 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 H3BS24 57 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 H7C2Y5 167 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 M0R3G1 203 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 TNFSF11O14788 317 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 CHST10O43529 356 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 CTSVO60911 334 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 ENTPD6O75354 484 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SUPT7LO94864 414 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 S1PR2O95136 353 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 FARS2O95363 451 aaKnown RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 C1QCP02747 245 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 F13BP05160 661 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 UQCRBP14927 111 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF182P17025 639 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 DDTP30046 118 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SLC6A1P30531 599 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 GNRHRP30968 328 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 TGFBR1P36897 503 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 IER3P46695 156 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 RAP1BP61224 184 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 RRAS2P62070 204 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 RPS18P62269 152 aaKnown RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 EWSR1Q01844 656 aaKnown RBP eCLIP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 IKZF1Q13422 519 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 MAPK14Q16539 360 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 TATDN3Q17R31 274 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 RNASE10Q5GAN6 216 aaKnown RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SIRPB2Q5JXA9 342 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 AGAP7PQ5VUJ5 663 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 VASNQ6EMK4 673 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 LETMD1Q6P1Q0 360 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SMARCD3Q6STE5 483 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM205Q6UW68 189 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 RNF165Q6ZSG1 346 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 ISCA2Q86U28 154 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 PDSS2Q86YH6 399 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 LGI3Q8N145 548 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 LFNGQ8NES3 379 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 NOXO1Q8NFA2 376 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 NPRL2Q8WTW4 380 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 ISL2Q96A47 359 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 C12orf43Q96C57 262 aaKnown RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SCMH1Q96GD3 660 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 HIST1H2AHQ96KK5 128 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 AGAP4Q96P64 663 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SMIM14Q96QK8 99 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SERPINI1Q99574 410 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SDHCQ99643 169 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 GPR22Q99680 433 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 HIST1H2AJQ99878 128 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 FUNDC2Q9BWH2 189 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 FAIM2Q9BWQ8 316 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 PECRQ9BY49 303 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 RERGLQ9H628 205 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 ACSS3Q9H6R3 686 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 AKTIPQ9H8T0 292 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 PLAC1Q9HBJ0 212 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 NANSQ9NR45 359 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 PAK1IP1Q9NWT1 392 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 C1orf123Q9NWV4 160 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 HRASLS2Q9NWW9 162 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF224Q9NZL3 707 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 KLRF1Q9NZS2 232 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 GNG12Q9UBI6 72 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 CLN8Q9UBY8 286 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 LGALS13Q9UHV8 139 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 ZNF230Q9UIE0 474 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 FAM96BQ9Y3D0 163 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 LRRK2Q5S007 2527 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 PHF3Q92576 2039 aaKnown RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 RP1L1Q8IWN7 2480 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 LOC105371242A0A075B767 164 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 TRAV17A0A0B4J275 112 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 KIR2DL5BA0A0G2JN68 375 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 KIR2DL5BA0A0G2JPC4 375 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 A0A1B0GX78 115 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 A0A1W2PPV9 198 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 PSMB11A5LHX3 300 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 OR11H12B2RN74 326 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 TMEM150CB9EJG8 249 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 C5orf58C9J3I9 102 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 NPIPB6E9PJ23 425 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 CLDN34H7C241 214 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 GPR31O00270 319 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SIGLEC5O15389 551 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 PDE6DO43924 150 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 FKBP6O75344 327 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 DEAF1O75398 565 aaPredicted RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 HSBP1O75506 76 aa2.36□□□□□ -2.03
PRPF39-206ENST00000554429 TRMUO75648 421 aaKnown RBP2.36□□□□□ -2.03
PRPF39-206ENST00000554429 SULT1C4O75897 302 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms