RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RGCCQ9H4X1 137 aa11□□□□□ -0.65
SHMT2-211ENST00000554310 A0A0G2JMP0 313 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 A0A0X1KG70 313 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 C5orf63A6NC05 138 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 TBX1O43435 398 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 PLPP2O43688 288 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 GMDSO60547 372 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 FSTL3O95633 263 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 PTBP3O95758 552 aaKnown RBP10.99□□□□□ -0.65
SHMT2-211ENST00000554310 PNPP00491 289 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 SBK2P0C263 348 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 CA6P23280 308 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 GADD45AP24522 165 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 SRP14P37108 136 aaKnown RBP10.99□□□□□ -0.65
SHMT2-211ENST00000554310 DDOSTP39656 456 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 ZNF121P58317 390 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-211ENST00000554310 PSMA6P60900 246 aaKnown RBP10.99□□□□□ -0.65
SHMT2-211ENST00000554310 VBP1P61758 197 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 MED22Q15528 200 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 OR8G1Q15617 311 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 TIMM50Q3ZCQ8 353 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 AADACL4Q5VUY2 407 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 NXNL2Q5VZ03 156 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 FAM57BQ71RH2 274 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 SLC16A9Q7RTY1 509 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 PRSS45Q7RTY3 260 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 BCDIN3DQ7Z5W3 292 aaKnown RBP10.99□□□□□ -0.65
SHMT2-211ENST00000554310 MOGAT3Q86VF5 341 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 LRRC28Q86X40 367 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-211ENST00000554310 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-211ENST00000554310 CROCCP3Q8IVE0 287 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 SPERTQ8NA61 448 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 OR4M2Q8NGB6 313 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 OR56B2PQ8NGI1 322 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 Q8TCH9 128 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 THEM6Q8WUY1 208 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 REEP6Q96HR9 211 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 OR5M11Q96RB7 305 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 OR10A2Q9H208 303 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 NIPAL2Q9H841 368 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 G6PC2Q9NQR9 355 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 LAMP5Q9UJQ1 280 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 PCDHB10Q9UN67 800 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 KLHDC2Q9Y2U9 406 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 EXOSC1Q9Y3B2 195 aaKnown RBP10.99□□□□□ -0.65
SHMT2-211ENST00000554310 N6AMT1Q9Y5N5 214 aa10.99□□□□□ -0.65
SHMT2-211ENST00000554310 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-211ENST00000554310 hCG_38984A0A1B0GV85 526 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 CCDC182A6NF36 153 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 J3QLI3 93 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 CCRL2O00421 344 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 MYL12BO14950 172 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 FOXH1O75593 365 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 IRF2P14316 349 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 ALOX5APP20292 161 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 GATA3P23771 443 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 CPT2P23786 658 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 MTNR1AP48039 350 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 NCS1P62166 190 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 MZT1Q08AG7 82 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 MLLT11Q13015 90 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-211ENST00000554310 HNRNPA0Q13151 305 aaKnown RBP10.98□□□□□ -0.65
SHMT2-211ENST00000554310 SCGB2A2Q13296 93 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 MAB21L1Q13394 359 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 TMED1Q13445 227 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 SPHARQ15513 63 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 ZNF829Q3KNS6 432 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-211ENST00000554310 USP43Q70EL4 1123 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 GID4Q8IVV7 300 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 FTMTQ8N4E7 242 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 PLPP7Q8NBV4 271 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 OR11L1Q8NGX0 322 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 NDNFQ8TB73 568 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 RPL3LQ92901 407 aaKnown RBP10.98□□□□□ -0.65
SHMT2-211ENST00000554310 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 PGAM5Q96HS1 289 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 OPALINQ96PE5 141 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 CNN2Q99439 309 aaKnown RBP10.98□□□□□ -0.65
SHMT2-211ENST00000554310 TEAD3Q99594 435 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 JAM3Q9BX67 310 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 PATZ1Q9HBE1 687 aaKnown RBP10.98□□□□□ -0.65
SHMT2-211ENST00000554310 ISYNA1Q9NPH2 558 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 EXOGQ9Y2C4 368 aaKnown RBP10.98□□□□□ -0.65
SHMT2-211ENST00000554310 TMEM14AQ9Y6G1 99 aa10.98□□□□□ -0.65
SHMT2-211ENST00000554310 CUBNO60494 3623 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 PPIAL4EA0A075B759 164 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 PPIAL4CA0A0B4J2A2 164 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 IGHV3-64DA0A0J9YX35 117 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 SLC22A31A6NKX4 558 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 ANKRD30BLA7E2S9 258 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 A8MXK9 166 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 F5H0A9 414 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-211ENST00000554310 PPIAL4DF5H284 164 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 CYB5R3P00387 301 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-211ENST00000554310 PPIAL4FP0DN26 164 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 MYL12AP19105 171 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 HTR1FP30939 366 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 LSM3P62310 102 aaKnown RBP10.97□□□□□ -0.65
SHMT2-211ENST00000554310 FAM3AP98173 230 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 DCAF12L2Q5VW00 463 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms