RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 SPIBQ01892 262 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 ID3Q02535 119 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.66□□□□□ -1.34
ACTN1-212ENST00000554158 RSPO1Q2MKA7 263 aaPredicted RBP6.66□□□□□ -1.34
ACTN1-212ENST00000554158 SLC35F1Q5T1Q4 408 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 DCXRQ7Z4W1 244 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 ZBTB46Q86UZ6 589 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 NDUFA11Q86Y39 141 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 ZDHHC21Q8IVQ6 265 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 PNKDQ8N490 385 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 FAM86B1Q8N7N1 296 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 CYB561A3Q8NBI2 242 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 CSNK2A3Q8NEV1 391 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 OR1M1Q8NGA1 313 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 OR5T2Q8NGG2 359 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 C8orf46Q8TAG6 207 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 CFHR4Q92496 578 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 MCUR1Q96AQ8 359 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 PHF21AQ96BD5 680 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 RCN3Q96D15 328 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 DUS3LQ96G46 650 aaKnown RBP6.66□□□□□ -1.34
ACTN1-212ENST00000554158 REEP6Q96HR9 211 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 HIST1H2AAQ96QV6 131 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 KCNJ15Q99712 375 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 KCTD14Q9BQ13 255 aaPredicted RBP6.66□□□□□ -1.34
ACTN1-212ENST00000554158 OR52D1Q9H346 318 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 HEXA-AS1Q9H8Q6 139 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 SNTG1Q9NSN8 517 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 PITPNC1Q9UKF7 332 aa6.66□□□□□ -1.34
ACTN1-212ENST00000554158 SAMD4AQ9UPU9 718 aaKnown RBP6.66□□□□□ -1.34
ACTN1-212ENST00000554158 TRBV23-1A0A0A0MS06 115 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 TRBV4-1A0A0J9YWV2 114 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 A0A1B0GW55 424 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 TVP23AA6NH52 213 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 TMEM210A6NLX4 147 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 CDIPTO14735 213 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DUX4L2P0CJ85 424 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DUX4L3P0CJ86 424 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DUX4L4P0CJ87 422 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DUX4L5P0CJ88 424 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DUX4L6P0CJ89 424 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DUX4L7P0CJ90 424 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 GLRA1P23415 457 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 FMO3P31513 532 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 PYCR1P32322 319 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 CX3CR1P49238 355 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 ENTPD1P49961 510 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DLX1P56177 255 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 CAV3P56539 151 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 CSNK2BP67870 215 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 CBX1P83916 185 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 AANATQ16613 207 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 RPL13AP3Q6NVV1 102 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DUX4L9Q6RFH8 374 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-212ENST00000554158 WDR82Q6UXN9 313 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 SLC16A9Q7RTY1 509 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-212ENST00000554158 MRPL41Q8IXM3 137 aaKnown RBP6.65□□□□□ -1.34
ACTN1-212ENST00000554158 TIGD4Q8IY51 512 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 FGFRL1Q8N441 504 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 TMEM185AQ8NFB2 350 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 OR52H1Q8NGJ2 320 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 OR10Z1Q8NGY1 313 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 RP9Q8TA86 221 aaKnown RBP6.65□□□□□ -1.34
ACTN1-212ENST00000554158 RORBQ92753 470 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DPF1Q92782 380 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 SLAMF6Q96DU3 332 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 MAP6Q96JE9 813 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 HOPXQ9BPY8 73 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-212ENST00000554158 PRSS22Q9GZN4 317 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 OR10A2Q9H208 303 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 MMP28Q9H239 520 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 PNRC2Q9NPJ4 139 aaKnown RBP6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DUX4Q9UBX2 424 aa6.65□□□□□ -1.34
ACTN1-212ENST00000554158 DSCAML1Q8TD84 2053 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 OR6C68A6NDL8 312 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 E9PQ18 207 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 RGS13O14921 159 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 DIRAS1O95057 198 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 SNRPBP14678 240 aaKnown RBP6.64□□□□□ -1.35
ACTN1-212ENST00000554158 RPS27P42677 84 aaKnown RBP6.64□□□□□ -1.35
ACTN1-212ENST00000554158 TGM4P49221 684 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 NUDT2P50583 147 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 BMXP51813 675 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 BLVRAP53004 296 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 SLC35A2P78381 396 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 CD69Q07108 199 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 SF3A3Q12874 501 aaKnown RBP eCLIP6.64□□□□□ -1.35
ACTN1-212ENST00000554158 DCTN2Q13561 401 aaKnown RBP6.64□□□□□ -1.35
ACTN1-212ENST00000554158 EIF2B1Q14232 305 aaKnown RBP6.64□□□□□ -1.35
ACTN1-212ENST00000554158 ATPAF1Q5TC12 328 aaPredicted RBP6.64□□□□□ -1.35
ACTN1-212ENST00000554158 FOXB2Q5VYV0 432 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 STUMQ69YW2 141 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 FAM57BQ71RH2 274 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 PIGWQ7Z7B1 504 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 THNSL2Q86YJ6 484 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 Q8N7P7 452 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 OR6K6Q8NGW6 343 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 PPP1R35Q8TAP8 253 aa6.64□□□□□ -1.35
ACTN1-212ENST00000554158 FAM81AQ8TBF8 368 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms