RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 MRPL48Q96GC5 212 aaKnown RBP19.52■□□□□ 0.72
NEK9-203ENST00000553945 RNF170Q96K19 258 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 HIST1H2AAQ96QV6 131 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 ADI1Q9BV57 179 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 PATZ1Q9HBE1 687 aaKnown RBP19.52■□□□□ 0.72
NEK9-203ENST00000553945 HIF1ANQ9NWT6 349 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 CDC42EP3Q9UKI2 254 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 MYRFQ9Y2G1 1151 aa19.52■□□□□ 0.72
NEK9-203ENST00000553945 C2CD3Q4AC94 2353 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 SONP18583 2426 aaKnown RBP19.51■□□□□ 0.71
NEK9-203ENST00000553945 A0A1B0GTI1 187 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 CEACAM18A8MTB9 384 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 J3QLW9 94 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 PLPP2O43688 288 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 ZNF19P17023 458 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 THBS2P35442 1172 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 CAPGP40121 348 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 OR12D2P58182 307 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 CSNK2BP67870 215 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 ZNF154Q13106 437 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 CR1LQ2VPA4 569 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 CHRFAM7AQ494W8 412 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 KLHL22Q53GT1 634 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 WDR38Q5JTN6 314 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 FAM120AOSQ5T036 256 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 ZBTB37Q5TC79 503 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 IL17RELQ6ZVW7 336 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 PRSS35Q8N3Z0 413 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 DEFB108BQ8NET1 73 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 TMEM246Q9BRR3 403 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 BEX2Q9BXY8 128 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 SHARPINQ9H0F6 387 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 MRPS18AQ9NVS2 196 aaKnown RBP19.51■□□□□ 0.71
NEK9-203ENST00000553945 ENPP5Q9UJA9 477 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 V9GYS6 101 aa19.51■□□□□ 0.71
NEK9-203ENST00000553945 TRAV20A0A0B4J274 112 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 A0A1B0GVI7 797 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 H3BSH0 61 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 IGHA1P01876 353 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 CD80P33681 288 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 ACTA2P62736 377 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 ACTG2P63267 376 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 LCN2P80188 198 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 IL18R1Q13478 541 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 ZNF404Q494X3 552 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 CEP78Q5JTW2 689 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 MOB3CQ70IA8 216 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 DOK3Q7L591 496 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 HPSE2Q8WWQ2 592 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 C4orf36Q96KX1 117 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 ALG8Q9BVK2 526 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 FGF23Q9GZV9 251 aaPredicted RBP19.5■□□□□ 0.71
NEK9-203ENST00000553945 METTL17Q9H7H0 456 aaPredicted RBP19.5■□□□□ 0.71
NEK9-203ENST00000553945 RNPEPL1Q9HAU8 725 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 LPAR3Q9UBY5 353 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 SVEP1Q4LDE5 3571 aa19.5■□□□□ 0.71
NEK9-203ENST00000553945 TMEM210A6NLX4 147 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 H0YAE9 185 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 H0YHG0 523 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 FSTL3O95633 263 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 RPS2P15880 293 aaKnown RBP19.49■□□□□ 0.71
NEK9-203ENST00000553945 HNF1AP20823 631 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 PCMT1P22061 227 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 GALEQ14376 348 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 PLCXD3Q63HM9 321 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 KRT74Q7RTS7 529 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 C11orf53Q8IXP5 236 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 OR14K1Q8NGZ2 314 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 RNF166Q96A37 237 aaPredicted RBP19.49■□□□□ 0.71
NEK9-203ENST00000553945 MYCBPQ99417 103 aaPredicted RBP19.49■□□□□ 0.71
NEK9-203ENST00000553945 INPP5EQ9NRR6 644 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 ERVK13-1Q9NX77 482 aa19.49■□□□□ 0.71
NEK9-203ENST00000553945 A6NIN4 97 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 F5H0A9 414 aaPredicted RBP19.48■□□□□ 0.71
NEK9-203ENST00000553945 C3orf80F5H4A9 247 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 SYT7O43581 403 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 GNAO1P09471 354 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 CCL1P22362 96 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 KIR3DL2P43630 455 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 GPM6AP51674 278 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 CEACAM21Q3KPI0 293 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 DMRTC1Q5HYR2 192 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 SFRP4Q6FHJ7 346 aaPredicted RBP19.48■□□□□ 0.71
NEK9-203ENST00000553945 C8orf59Q8N0T1 100 aaPredicted RBP19.48■□□□□ 0.71
NEK9-203ENST00000553945 OR2G2Q8NGZ5 317 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 LRRC29Q8WV35 223 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 NRG4Q8WWG1 115 aa19.48■□□□□ 0.71
NEK9-203ENST00000553945 RPL3LQ92901 407 aaKnown RBP19.48■□□□□ 0.71
NEK9-203ENST00000553945 FGF20Q9NP95 211 aaPredicted RBP19.48■□□□□ 0.71
NEK9-203ENST00000553945 ZNF732B4DXR9 585 aa19.47■□□□□ 0.71
NEK9-203ENST00000553945 LGALS8O00214 317 aa19.47■□□□□ 0.71
NEK9-203ENST00000553945 CDIPTO14735 213 aa19.47■□□□□ 0.71
NEK9-203ENST00000553945 FOXH1O75593 365 aa19.47■□□□□ 0.71
NEK9-203ENST00000553945 NRASP01111 189 aa19.47■□□□□ 0.71
NEK9-203ENST00000553945 HTR1AP08908 422 aa19.47■□□□□ 0.71
NEK9-203ENST00000553945 WNT2P09544 360 aa19.47■□□□□ 0.71
NEK9-203ENST00000553945 UBCP0CG48 685 aaKnown RBP19.47■□□□□ 0.71
NEK9-203ENST00000553945 SEC61A1P61619 476 aaKnown RBP19.47■□□□□ 0.71
NEK9-203ENST00000553945 GNG3P63215 75 aa19.47■□□□□ 0.71
NEK9-203ENST00000553945 ESCO2Q56NI9 601 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms