RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 FXNQ16595 210 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 SPICQ8N5J4 248 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 CLEC18CQ8NCF0 446 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 TVP23CQ96ET8 276 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 STRCP1A6NGW2 1772 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 CHEK1O14757 476 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 CRYABP02511 175 aaKnown RBP10.35□□□□□ -0.75
SYNE2-208ENST00000553289 IAPPP10997 89 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 HIST1H1DP16402 221 aaKnown RBP10.35□□□□□ -0.75
SYNE2-208ENST00000553289 HOXC8P31273 242 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 RPS16P62249 146 aaKnown RBP10.35□□□□□ -0.75
SYNE2-208ENST00000553289 HLA-BQ31612 363 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 TRAT1Q6PIZ9 186 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 RELL2Q8NC24 303 aaPredicted RBP10.35□□□□□ -0.75
SYNE2-208ENST00000553289 CABLES2Q9BTV7 478 aa10.35□□□□□ -0.75
SYNE2-208ENST00000553289 AKR7A2O43488 359 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 PRKNO60260 465 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-208ENST00000553289 CTSVO60911 334 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 CTRB1P17538 263 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 CDONQ4KMG0 1287 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 CTRB2Q6GPI1 263 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 OR52N4Q8NGI2 321 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 AKR7LQ8NHP1 331 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 ERGIC1Q969X5 290 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 MAP6Q96JE9 813 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 SIPA1L3O60292 1781 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-208ENST00000553289 SDK1Q7Z5N4 2213 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 TRGV10A0A0A0MS01 117 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 CST4P01036 141 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 MDH2P40926 338 aaKnown RBP10.34□□□□□ -0.75
SYNE2-208ENST00000553289 IGFBP7Q16270 282 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 GSG1Q2KHT4 349 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 NCR3LG1Q68D85 454 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 SPNS2Q8IVW8 549 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 OR52B4Q8NGK2 314 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 GPR119Q8TDV5 335 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 ZNF251Q9BRH9 671 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 GNB4Q9HAV0 340 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 NIT2Q9NQR4 276 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 WNT16Q9UBV4 365 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 TOX3O15405 576 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-208ENST00000553289 SPNP16150 400 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 HYAL1Q12794 435 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 OR2B11Q5JQS5 317 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 RPL7L1Q6DKI1 246 aaKnown RBP10.34□□□□□ -0.75
SYNE2-208ENST00000553289 ADPRHL1Q8NDY3 354 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 OR1J1Q8NGS3 322 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 ORAI1Q96D31 301 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 LURAP1Q96LR2 239 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 ALKBH3Q96Q83 286 aaPredicted RBP10.34□□□□□ -0.75
SYNE2-208ENST00000553289 PRRX2Q99811 253 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 LTBP4Q8N2S1 1624 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 NPIPB8E9PQR5 432 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 FBP1P09467 338 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 OR5G3P0C626 314 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 SPP1P10451 314 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 TNFRSF1AP19438 455 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 CDAP32320 146 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 METAP1P53582 386 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 GUCA2AQ02747 115 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 C1orf53Q5VUE5 145 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 OR4C3Q8NH37 302 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 M1APQ8TC57 530 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 PIK3IP1Q96FE7 263 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 C20orf141Q9NUB4 165 aa10.34□□□□□ -0.75
SYNE2-208ENST00000553289 TRAV17A0A0B4J275 112 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 ANGPTL7O43827 346 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 OR7C2O60412 319 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 ZFPL1O95159 310 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 SLC25A6P12236 298 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 SSX1Q16384 188 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 GLCCI1Q86VQ1 547 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 GABRG3Q99928 467 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF586Q9NXT0 402 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 GAR1Q9NY12 217 aaKnown RBP10.33□□□□□ -0.76
SYNE2-208ENST00000553289 GON4LQ3T8J9 2241 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 TRGV5A0A0B4J1U4 118 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 TMEM272A0A1B0GTI8 110 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 SHISA7A6NL88 538 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 SPRY1O43609 319 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-208ENST00000553289 KISS1Q15726 138 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 ANKRD37Q7Z713 158 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 FBXL14Q8N1E6 418 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF784Q8NCA9 323 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-208ENST00000553289 RXFP4Q8TDU9 374 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 CLDN23Q96B33 292 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 RPUSD4Q96CM3 377 aaKnown RBP10.33□□□□□ -0.76
SYNE2-208ENST00000553289 POM121L2Q96KW2 1035 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 NMES1Q9C002 83 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 TINAGL1Q9GZM7 467 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-208ENST00000553289 STRCQ7RTU9 1775 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 NUP205Q92621 2012 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 GPR37O15354 613 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 GALNSP34059 522 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 OR1C1Q15619 314 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 WFDC8Q8IUA0 241 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF707Q96C28 371 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-208ENST00000553289 TSPAN32Q96QS1 320 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 PLEKHB1Q9UF11 243 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-208ENST00000553289 MTCH2Q9Y6C9 303 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms