RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 H2BFMP0C1H6 154 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 SELEP16581 610 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 ALOX5APP20292 161 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 HTR1FP30939 366 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 OPRL1P41146 370 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 RAG2P55895 527 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 RPL15P61313 204 aaKnown RBP9.84□□□□□ -0.83
CKAP4-202ENST00000552828 FGF12P61328 243 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 SNRPGP62308 76 aaKnown RBP9.84□□□□□ -0.83
CKAP4-202ENST00000552828 RELBQ01201 579 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 SRSF4Q08170 494 aaKnown RBP9.84□□□□□ -0.83
CKAP4-202ENST00000552828 MAB21L1Q13394 359 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 TMED1Q13445 227 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 SLC25A30Q5SVS4 291 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 FAM201AQ5SY85 155 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 GPR157Q5UAW9 335 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 MEDAGQ5VYS4 303 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 OLFML2AQ68BL7 652 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 KCTD18Q6PI47 426 aaPredicted RBP9.84□□□□□ -0.83
CKAP4-202ENST00000552828 LYPD2Q6UXB3 125 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 C17orf107Q6ZR85 190 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 KIR3DL3Q8N743 410 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 ZNF555Q8NEP9 628 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 UBE2FQ969M7 185 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 FAM71F1Q96KD3 344 aaPredicted RBP9.84□□□□□ -0.83
CKAP4-202ENST00000552828 AMELYQ99218 206 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 MNTQ99583 582 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 SP140LQ9H930 580 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 FAM118AQ9NWS6 357 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 C1RLQ9NZP8 487 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 DNAJC27Q9NZQ0 273 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 POMT1Q9Y6A1 747 aa9.84□□□□□ -0.83
CKAP4-202ENST00000552828 CLPSL1A2RUU4 121 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 SNTNA6NMZ2 147 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 C22orf46C9J442 243 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 SLC16A6O15403 523 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 ENSAO43768 121 aaKnown RBP9.83□□□□□ -0.84
CKAP4-202ENST00000552828 PTBP3O95758 552 aaKnown RBP9.83□□□□□ -0.84
CKAP4-202ENST00000552828 LIPFP07098 398 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 MMP9P14780 707 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 PEX2P28328 305 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 ATP6V1E1P36543 226 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 CD200P41217 278 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 CX3CR1P49238 355 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 NPY4RP50391 375 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 HCCSP53701 268 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 POU4F2Q12837 409 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 FIP1L1Q6UN15 594 aaKnown RBP9.83□□□□□ -0.84
CKAP4-202ENST00000552828 KRT77Q7Z794 578 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 BHLHE23Q8NDY6 225 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 OR51G2Q8NGK0 314 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 ASB17Q8WXJ9 295 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 MROQ9BYG7 248 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 CHIAQ9BZP6 476 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 NIPAL2Q9H841 368 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 ADGRL4Q9HBW9 690 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 SCOCQ9UIL1 159 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.83□□□□□ -0.84
CKAP4-202ENST00000552828 KLHDC2Q9Y2U9 406 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 N6AMT1Q9Y5N5 214 aa9.83□□□□□ -0.84
CKAP4-202ENST00000552828 WNK1Q9H4A3 2382 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 IGHV3-64DA0A0J9YX35 117 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 CENPVL3A0A0U1RRI6 287 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF879B4DU55 563 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF670-ZNF695F2Z2N8 137 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 P2RY10O00398 339 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 ENTPD6O75354 484 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 HLA-DPB1P04440 258 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 CRYBA1P05813 215 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 ANXA2P07355 339 aaKnown RBP9.82□□□□□ -0.84
CKAP4-202ENST00000552828 MELTFP08582 738 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 SLC2A1P11166 492 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 IRF2P14316 349 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 CFHR2P36980 270 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 GK2Q14410 553 aaPredicted RBP9.82□□□□□ -0.84
CKAP4-202ENST00000552828 OGFRL1Q5TC84 451 aaPredicted RBP9.82□□□□□ -0.84
CKAP4-202ENST00000552828 CD276Q5ZPR3 534 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 DEGS2Q6QHC5 323 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 PGAP1Q75T13 922 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 SLC35F2Q8IXU6 374 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 PLPP7Q8NBV4 271 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 OR52H1Q8NGJ2 320 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 OR11L1Q8NGX0 322 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 RHOXF1Q8NHV9 184 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 SSMEM1Q8WWF3 244 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 Q96MT0 163 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 APOL4Q9BPW4 351 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 MMP27Q9H306 513 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 CLN6Q9NWW5 311 aa9.82□□□□□ -0.84
CKAP4-202ENST00000552828 M0QZ24 198 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 DLGAP1O14490 977 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 TBX1O43435 398 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 XRCC2O43543 280 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 FAM20BO75063 409 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF254O75437 659 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 SFTPBP07988 381 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 OR2T7P0C7T2 308 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF121P58317 390 aaPredicted RBP9.81□□□□□ -0.84
CKAP4-202ENST00000552828 KRTAP10-3P60369 221 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms