RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 COLCA1Q6ZS62 124 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 CHMP1BQ7LBR1 199 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 ZNF584Q8IVC4 421 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 ZFAND1Q8TCF1 268 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 SPSB4Q96A44 273 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 TM2D1Q9BX74 207 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 C1QTNF5Q9BXJ0 243 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 PRDM14Q9GZV8 571 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 RGCCQ9H4X1 137 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
RAB5C-208ENST00000551338 CLCF1Q9UBD9 225 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 GHRLQ9UBU3 117 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 ZNF391Q9UJN7 358 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 ZNF222Q9UK12 451 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 NPTNQ9Y639 398 aa10□□□□□ -0.81
RAB5C-208ENST00000551338 BDP1A6H8Y1 2624 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 IGKV1-27A0A075B6S5 117 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 LOC100509620A0A075B734 347 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 SLC22A20A6NK97 555 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 SNRPGP15A8MWD9 76 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 ZNF736B4DX44 427 aaPredicted RBP9.99□□□□□ -0.81
RAB5C-208ENST00000551338 FABP7O15540 132 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 SSNA1O43805 119 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 ATP6V1G1O75348 118 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 RAD51DO75771 328 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 CYB5AP00167 134 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 HLA-HP01893 362 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 AMY2AP04746 511 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 HIST1H1DP16402 221 aaKnown RBP9.99□□□□□ -0.81
RAB5C-208ENST00000551338 MGMTP16455 207 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 ZNF24P17028 368 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 TMEM50BP56557 158 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 CNN3Q15417 329 aaKnown RBP9.99□□□□□ -0.81
RAB5C-208ENST00000551338 SF3B4Q15427 424 aaKnown RBP eCLIP9.99□□□□□ -0.819e-6■□□□□ 11.2
RAB5C-208ENST00000551338 SLC22A6Q4U2R8 563 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 Q5BKY6 102 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 FAM89BQ8N5H3 189 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 GVQW1Q8N7I0 195 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 OR4S1Q8NGB4 309 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 OR56B1Q8NGI3 324 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 OR10K1Q8NGX5 313 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 SPSB1Q96BD6 273 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 MED30Q96HR3 178 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 URM1Q9BTM9 101 aaKnown RBP9.99□□□□□ -0.81
RAB5C-208ENST00000551338 CST11Q9H112 138 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 C12orf49Q9H741 205 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 GP6Q9HCN6 339 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.99□□□□□ -0.81
RAB5C-208ENST00000551338 ING4Q9UNL4 249 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 KCNK7Q9Y2U2 307 aa9.99□□□□□ -0.81
RAB5C-208ENST00000551338 ESPL1Q14674 2120 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 TRAV17A0A0B4J275 112 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 FAM172BPA6NC97 362 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 ZNHIT1O43257 154 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 SS18L1O75177 396 aaPredicted RBP9.98□□□□□ -0.81
RAB5C-208ENST00000551338 SERPINA2P20848 420 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 MPZP25189 248 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 OR3A2P47893 321 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 GNG2P59768 71 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 FAM189A2Q15884 450 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 PNLIPRP3Q17RR3 467 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 CLVS2Q5SYC1 327 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 LAMTOR1Q6IAA8 161 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 NCCRP1Q6ZVX7 275 aaPredicted RBP9.98□□□□□ -0.81
RAB5C-208ENST00000551338 BPIFB2Q8N4F0 458 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 OR52B4Q8NGK2 314 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 OR1K1Q8NGR3 316 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 OR13C8Q8NGS7 320 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 RAB3CQ96E17 227 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 SLC6A7Q99884 636 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 GPN1Q9HCN4 374 aaPredicted RBP9.98□□□□□ -0.81
RAB5C-208ENST00000551338 IFT46Q9NQC8 304 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 DLL4Q9NR61 685 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 SLC2A8Q9NY64 477 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 MGAT4CQ9UBM8 478 aa9.98□□□□□ -0.81
RAB5C-208ENST00000551338 ZNF816-ZNF321PA0A0X1KG74 233 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 OR14I1A6ND48 311 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 DISC1C4P0D8 188 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 G3V3Q6 166 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 CREBL2O60519 120 aaPredicted RBP9.97□□□□□ -0.81
RAB5C-208ENST00000551338 WISP2O76076 250 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 IL18BPO95998 194 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 NRASP01111 189 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 RLN1P04808 185 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 NAT1P18440 290 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 PRKACBP22694 351 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 MPGP29372 298 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 MEF2DQ14814 521 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 ZMYND11Q15326 602 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 RNASE10Q5GAN6 216 aaKnown RBP9.97□□□□□ -0.81
RAB5C-208ENST00000551338 ZBTB37Q5TC79 503 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 FBXW9Q5XUX1 488 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 OR52W1Q6IF63 320 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 TMEM53Q6P2H8 277 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 LHFPL2Q6ZUX7 228 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 NLRC3Q7RTR2 1065 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 C9orf62Q8N4C0 152 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 SPICQ8N5J4 248 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 STEAP2Q8NFT2 490 aa9.97□□□□□ -0.81
RAB5C-208ENST00000551338 OR51T1Q8NGJ9 327 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms