RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SUMF2Q8NBJ7 301 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 NPEPL1Q8NDH3 523 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 Q8NFD4 153 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ZCCHC10Q8TBK6 192 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 TMEM255BQ8WV15 326 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ASB5Q8WWX0 329 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 THRSPQ92748 146 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 TSLPQ969D9 159 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FAM3DQ96BQ1 224 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 IGSF21Q96ID5 467 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 SLC35G5Q96KT7 338 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 PRAP1Q96NZ9 151 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 IL17FQ96PD4 163 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 LPAR4Q99677 370 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 MS4A8Q9BY19 250 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 TRIM2Q9C040 744 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 CTDSP1Q9GZU7 261 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ATG10Q9H0Y0 220 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 C11orf1Q9H5F2 150 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 PRSS16Q9NQE7 514 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FKBP11Q9NYL4 201 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FOXJ2Q9P0K8 574 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 MRPL27Q9P0M9 148 aaKnown RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 KIAA1456Q9P272 454 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FBXL17Q9UF56 701 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 SH3BGRL2Q9UJC5 107 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 CCNL1Q9UK58 526 aaPredicted RBP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 ADAM29Q9UKF5 820 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 FUT9Q9Y231 359 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 OR51B4Q9Y5P0 310 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 PUS1Q9Y606 427 aaKnown RBP eCLIP4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 COLEC10Q9Y6Z7 277 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 PTPRDP23468 1912 aa4.67□□□□□ -1.66
LSM3P2-201ENST00000551246 A0A087WV48 116 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 A0A1W2PR48 441 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 RBFOX3A6NFN3 312 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CPSF4LA6NMK7 179 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 RIIAD1A6NNX1 92 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 F5H5T6 163 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 LEFTY2O00292 366 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 ARPC3O15145 178 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CYB5BO43169 146 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 NUDT21O43809 227 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 PRICKLE3O43900 615 aaPredicted RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 STK17BO94768 372 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 SEMA4FO95754 770 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 IFNA21P01568 189 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 KLK1P06870 262 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF28P17035 718 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 HMGA1P17096 107 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 RPL12P30050 165 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CHRNB4P30926 498 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 FCGR2CP31995 323 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 PPP1CCP36873 323 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 PSMB10P40306 273 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CTRLP40313 264 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 P2RY1P47900 373 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 POLR2HP52434 150 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 ELLP55199 621 aaPredicted RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 PRPS1P60891 318 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 UBE2KP61086 200 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 RANP62826 216 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CCL20P78556 96 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 HLA-DRB3P79483 266 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 DLX2Q07687 328 aaPredicted RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 RASGEF1BQ0VAM2 473 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 PNRC1Q12796 327 aaPredicted RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 OR5I1Q13606 314 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 RAB32Q13637 225 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 EBPQ15125 230 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CEBPEQ15744 281 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 RAB11BQ15907 218 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 ANKRD55Q3KP44 614 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 TMEM128Q5BJH2 165 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 GPR157Q5UAW9 335 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 KHDRBS2Q5VWX1 349 aaKnown RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CFAP161Q6P656 301 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 SSX7Q7RTT5 188 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 OLIG3Q7RTU3 272 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 MYPOPQ86VE0 399 aaPredicted RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 TMPRSS12Q86WS5 348 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CACUL1Q86Y37 369 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 FOXRED2Q8IWF2 684 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 C20orf196Q8IYI0 205 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF100Q8IYN0 542 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF433Q8N7K0 673 aaPredicted RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 C12orf76Q8N812 135 aaPredicted RBP4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CYB561A3Q8NBI2 242 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 OR51D1Q8NGF3 324 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 OR52L1Q8NGH7 329 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CD300LFQ8TDQ1 290 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNRF4Q8WWF5 429 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CORO2AQ92828 525 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 KLK6Q92876 244 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 CDS1Q92903 461 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 EXTL1Q92935 676 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 UBE2E3Q969T4 207 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 TMEM18Q96B42 140 aa4.66□□□□□ -1.66
LSM3P2-201ENST00000551246 MOB3AQ96BX8 217 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms