RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 GOLGA8HP0CJ92 632 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 MUC1P15941 1255 aaPredicted RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 HTR1DP28221 377 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 PCK1P35558 622 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 P2RY2P41231 377 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 HTR2BP41595 481 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 CRATP43155 626 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 RANBP1P43487 201 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 HCAR3P49019 387 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 SYNJ2BPP57105 145 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 OR2B6P58173 313 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 MLF1P58340 268 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 DSTNP60981 165 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 TSPAN5P62079 268 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 IFFO1Q0D2I5 559 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 TRDNQ13061 729 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 DYNC1I2Q13409 638 aaKnown RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 DGCR6Q14129 220 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF266Q14584 549 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 PON2Q15165 354 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 ACTL10Q5JWF8 245 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 HES5Q5TA89 166 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 METTL21CQ5VZV1 264 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 SSX6Q7RTT6 188 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 SELENOHQ8IZQ5 122 aaKnown RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 COX18Q8N8Q8 333 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 UBAC2Q8NBM4 344 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 OR7G1Q8NGA0 311 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 OR11H7Q8NGC8 314 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 OR2Y1Q8NGV0 311 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 SUN5Q8TC36 379 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 ZFAND1Q8TCF1 268 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 LRRC29Q8WV35 223 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 GTF2H4Q92759 462 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 HAUS1Q96CS2 278 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF396Q96N95 335 aaPredicted RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 CIB1Q99828 191 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 SULT4A1Q9BR01 284 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 LLPHQ9BRT6 129 aaKnown RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 COPS4Q9BT78 406 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 BBS2Q9BXC9 721 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 SLIRPQ9GZT3 109 aaKnown RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 WDR55Q9H6Y2 383 aaPredicted RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF430Q9H8G1 570 aaPredicted RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 C6orf50Q9HD87 102 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 MYOZ1Q9NP98 299 aaPredicted RBP1.9□□□□□ -2.11
CCDC38-208ENST00000549876 SDHAF2Q9NX18 166 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 RHBDL2Q9NX52 303 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 MS4A12Q9NXJ0 267 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 MAT2BQ9NZL9 334 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 UBIAD1Q9Y5Z9 338 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 PCDH11XQ9BZA7 1347 aa1.9□□□□□ -2.11
CCDC38-208ENST00000549876 PALLDQ8WX93 1383 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 A0A0J9YXV3 536 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 A0A1B0GTI1 187 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 MKRN2OSH3BPM6 223 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 hCG_2039718K7EN88 272 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 RAD51BO15315 384 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 NDUFS6O75380 124 aaKnown RBP1.89□□□□□ -2.11
CCDC38-208ENST00000549876 SEMA3DO95025 777 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 BRI3O95415 125 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 LDOC1O95751 146 aaPredicted RBP1.89□□□□□ -2.11
CCDC38-208ENST00000549876 HLA-DPB1P04440 258 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 TPM3P06753 285 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 SLC35G6P0C7Q6 338 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 RNASE2P10153 161 aaKnown RBP1.89□□□□□ -2.11
CCDC38-208ENST00000549876 RBM34P42696 430 aaKnown RBP1.89□□□□□ -2.11
CCDC38-208ENST00000549876 CXCL5P42830 114 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 RGS6P49758 472 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 TPM4P67936 248 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 SLAMF1Q13291 335 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 COTL1Q14019 142 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 GINS1Q14691 196 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 OR1Q1Q15612 314 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 OR4D1Q15615 310 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 ZBTB6Q15916 424 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 AVPI1Q5T686 147 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 FAM27D1Q5T7N8 215 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 PLET1Q6UQ28 207 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 BHLHA15Q7RTS1 189 aaPredicted RBP1.89□□□□□ -2.11
CCDC38-208ENST00000549876 SLC30A8Q8IWU4 369 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 PRSS58Q8IYP2 241 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 METTL13Q8N6R0 699 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 CYB561A3Q8NBI2 242 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 OR10G6Q8NH81 332 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 DOK4Q8TEW6 326 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 LRRC45Q96CN5 670 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 RMI2Q96E14 147 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 FAM19A4Q96LR4 140 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 LINC00477Q96M19 166 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 ZNF75AQ96N20 296 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 ZFP3Q96NJ6 502 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 RDH12Q96NR8 316 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 SERPINB11Q96P15 392 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 TAAR1Q96RJ0 339 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 GABRG3Q99928 467 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 MED10Q9BTT4 135 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 ANGPTL4Q9BY76 406 aa1.89□□□□□ -2.11
CCDC38-208ENST00000549876 NDEL1Q9GZM8 345 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms