RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 ARV1Q9H2C2 271 aa2.6□□□□□ -1.99
SNRPF-202ENST00000549580 ZNF355PQ9NSJ1 428 aa2.6□□□□□ -1.99
SNRPF-202ENST00000549580 SDHAF2Q9NX18 166 aa2.6□□□□□ -1.99
SNRPF-202ENST00000549580 VAX2Q9UIW0 290 aa2.6□□□□□ -1.99
SNRPF-202ENST00000549580 RAB26Q9ULW5 256 aa2.6□□□□□ -1.99
SNRPF-202ENST00000549580 HES2Q9Y543 173 aa2.6□□□□□ -1.99
SNRPF-202ENST00000549580 BRCA1P38398 1863 aaKnown RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 RSPH10B2B2RC85 870 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 H0YJW9 148 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 K7EN84 100 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 PTTG1O95997 202 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 APCSP02743 223 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 OR5AL1P0C617 328 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 SLC35G6P0C7Q6 338 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 RSPH10BP0C881 870 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 CXCR1P25024 350 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 PCK1P35558 622 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 KIR3DL2P43630 455 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 CDK5Q00535 292 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 LRRC63Q05C16 580 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 DYNC1I2Q13409 638 aaKnown RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 MAD2L1BPQ15013 274 aaPredicted RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 SMUG1Q53HV7 270 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 MPV17L2Q567V2 206 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 FAM27D1Q5T7N8 215 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 KDM4DQ6B0I6 523 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 EPGNQ6UW88 154 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 ZFP2Q6ZN57 461 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 Q6ZVH6 145 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 WDFY1Q8IWB7 410 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 CA13Q8N1Q1 262 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 C17orf78Q8N4C9 275 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 CYB561D1Q8N8Q1 229 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 OR10G2Q8NGC3 310 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 PDCD6IPQ8WUM4 868 aaKnown RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 RXFP2Q8WXD0 754 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 RERGQ96A58 199 aaPredicted RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 KCNS1Q96KK3 526 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 ZNF488Q96MN9 340 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 C18orf15Q96N68 181 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 TRNT1Q96Q11 434 aaKnown RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 ZNF382Q96SR6 550 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 NDFIP1Q9BT67 221 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 EMC6Q9BV81 110 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 FGF23Q9GZV9 251 aaPredicted RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 RBFOX1Q9NWB1 397 aaKnown RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 RMND1Q9NWS8 449 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 CLEC2DQ9UHP7 191 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 ZNF223Q9UK11 482 aaPredicted RBP2.59□□□□□ -1.99
SNRPF-202ENST00000549580 POFUT2Q9Y2G5 429 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 TMEM14AQ9Y6G1 99 aa2.59□□□□□ -1.99
SNRPF-202ENST00000549580 IGSF9BQ9UPX0 1349 aa2.59□□□□□ -2
SNRPF-202ENST00000549580 NACAE9PAV3 2078 aa2.59□□□□□ -2
SNRPF-202ENST00000549580 PTPRTO14522 1441 aa2.59□□□□□ -2
SNRPF-202ENST00000549580 IGKV6D-21A0A0A0MT36 114 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 TMEM223A0PJW6 202 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 IQCF5A8MTL0 148 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 ZNF705GA8MUZ8 300 aaPredicted RBP2.58□□□□□ -2
SNRPF-202ENST00000549580 RAD51BO15315 384 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 FADS2O95864 444 aaKnown RBP2.58□□□□□ -2
SNRPF-202ENST00000549580 NQO2P16083 231 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 RPS9P46781 194 aaKnown RBP2.58□□□□□ -2
SNRPF-202ENST00000549580 RGS6P49758 472 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 MAP3K7CLP57077 242 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 DSTNP60981 165 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 IFITM3Q01628 133 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 CYP24A1Q07973 514 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 PPIDQ08752 370 aaKnown RBP2.58□□□□□ -2
SNRPF-202ENST00000549580 C2orf80Q0P641 193 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 TMEM236Q5W0B7 351 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 ENTHD1Q8IYW4 607 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 SLC7A5P1Q8MH63 180 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 OR4K5Q8NGD3 323 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 OR52P1PQ8NH57 321 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 ZFAND1Q8TCF1 268 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 DOK4Q8TEW6 326 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 RBBP8Q99708 897 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 TIMM29Q9BSF4 260 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 SFXN3Q9BWM7 321 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 C1orf198Q9H425 327 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 SLC38A10Q9HBR0 1119 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 C8orf17Q9NRJ1 99 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 HEBP1Q9NRV9 189 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 NECAP2Q9NVZ3 263 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 MRM2Q9UI43 246 aaKnown RBP2.58□□□□□ -2
SNRPF-202ENST00000549580 NXT1Q9UKK6 140 aaKnown RBP2.58□□□□□ -2
SNRPF-202ENST00000549580 RAB23Q9ULC3 237 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 SIGLEC7Q9Y286 467 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 ACOT9Q9Y305 439 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 TNS2Q63HR2 1409 aa2.58□□□□□ -2
SNRPF-202ENST00000549580 ZNF608Q9ULD9 1512 aaPredicted RBP2.58□□□□□ -2
SNRPF-202ENST00000549580 AHDC1Q5TGY3 1603 aaPredicted RBP2.57□□□□□ -2
SNRPF-202ENST00000549580 IGHV3-72A0A0B4J1Y9 119 aa2.57□□□□□ -2
SNRPF-202ENST00000549580 TRAV8-4A0A0B4J246 113 aa2.57□□□□□ -2
SNRPF-202ENST00000549580 NDUFC2-KCTD14E9PQ53 114 aa2.57□□□□□ -2
SNRPF-202ENST00000549580 RNASEK-C17orf49H0YIS7 233 aa2.57□□□□□ -2
SNRPF-202ENST00000549580 ZNF593O00488 134 aaPredicted RBP2.57□□□□□ -2
SNRPF-202ENST00000549580 MYL12BO14950 172 aa2.57□□□□□ -2
SNRPF-202ENST00000549580 PSPHP1O15172 72 aa2.57□□□□□ -2
SNRPF-202ENST00000549580 ENSAO43768 121 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms