RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 IGLV3-1P01715 115 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 DDOSTP39656 456 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 PRKXP51817 358 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 PCBD1P61457 104 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 C1orf100Q5SVJ3 147 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 OR2A2Q6IF42 318 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 ZNF529Q6P280 563 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 CCBE1Q6UXH8 406 aaPredicted RBP17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 ZNF627Q7L945 461 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 CHMP1BQ7LBR1 199 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 SERPINA12Q8IW75 414 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 CNEP1R1Q8N9A8 125 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 OR8B12Q8NGG6 310 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 ZNF775Q96BV0 537 aaPredicted RBP17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 HAVCR1Q96D42 359 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 SLC25A38Q96DW6 304 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 FBXO17Q96EF6 278 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 ZNF837Q96EG3 531 aaPredicted RBP17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 OPN3Q9H1Y3 402 aaPredicted RBP17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 TAS2R4Q9NYW5 299 aa17.24■□□□□ 0.35
CTDSP2-204ENST00000548823 PLA2G10O15496 165 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 TGM6O95932 706 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 PLAUP00749 431 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 YES1P07947 543 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 CEACAM16Q2WEN9 425 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 DOK3Q7L591 496 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 LINGO2Q7L985 606 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 LYPD6Q86Y78 171 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 CDH26Q8IXH8 852 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 PLPP7Q8NBV4 271 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 HTRA1Q92743 480 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 SPTSSAQ969W0 71 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 RFT1Q96AA3 541 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 S100A16Q96FQ6 103 aaKnown RBP17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 PRRG4Q9BZD6 226 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 LPAR3Q9UBY5 353 aa17.23■□□□□ 0.35
CTDSP2-204ENST00000548823 RFX2P48378 723 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 MRPS10P82664 201 aaKnown RBP17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 RAB11BQ15907 218 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 KRTAP27-1Q3LI81 207 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 MZT2BQ6NZ67 158 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 DNM1P46Q6ZS02 220 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 LRRC18Q8N456 261 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 SLC22A24Q8N4F4 322 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 DNAAF1Q8NEP3 725 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 OR6M1Q8NGM8 313 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 TRIM63Q969Q1 353 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 ABHD1Q96SE0 405 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 THAP7Q9BT49 309 aaPredicted RBP17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 ATPIF1Q9UII2 106 aa17.22■□□□□ 0.35
CTDSP2-204ENST00000548823 SGCEO43556 437 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 SYNGR3O43761 229 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 SPNP16150 400 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 RSPO1Q2MKA7 263 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 TSPO2Q5TGU0 170 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 DRAM2Q6UX65 266 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 PGAP1Q75T13 922 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 P4HA3Q7Z4N8 544 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 NRARPQ7Z6K4 114 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 OR5D14Q8NGL3 314 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 OR1J2Q8NGS2 313 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 FNDC9Q8TBE3 224 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 OR51E1Q8TCB6 317 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 SLC25A28Q96A46 364 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 FGGYQ96C11 551 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 C10orf35Q96D05 121 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 ALKBH3Q96Q83 286 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 TMEM204Q9BSN7 226 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 C11orf54Q9H0W9 315 aaPredicted RBP17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 RHBDL2Q9NX52 303 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 PLEK2Q9NYT0 353 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 TIMM10BQ9Y5J6 103 aa17.21■□□□□ 0.35
CTDSP2-204ENST00000548823 LOC100289279A0A1B0GTE1 492 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 H3BSH0 61 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 SPRY1O43609 319 aaPredicted RBP17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 FARS2O95363 451 aaKnown RBP17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 CGAP01215 116 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 THBDP07204 575 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 ERCC1P07992 297 aaPredicted RBP17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 ITGA5P08648 1049 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 FCGR2AP12318 317 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 BDKRB2P30411 391 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 KIR2DL2P43627 348 aaPredicted RBP17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 MAP2K3P46734 347 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 INPP1P49441 399 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 TAB1Q15750 504 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 ZNF813Q6ZN06 617 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 TUSC5Q8IXB3 177 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 OR1M1Q8NGA1 313 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 SYNPRQ8TBG9 265 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 CHAC2Q8WUX2 184 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 PTX4Q96A99 478 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 PGAM5Q96HS1 289 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 PLEKHA1Q9HB21 404 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 TMEM138Q9NPI0 162 aa17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 RBFOX1Q9NWB1 397 aaKnown RBP17.2■□□□□ 0.34
CTDSP2-204ENST00000548823 OR6C6A6NF89 314 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 M0R135 149 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 KRT33AO76009 404 aa17.19■□□□□ 0.34
CTDSP2-204ENST00000548823 ALX3O95076 343 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms