RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 HS3ST5Q8IZT8 346 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 FGFRL1Q8N441 504 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 OR1M1Q8NGA1 313 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 OR5T2Q8NGG2 359 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 OR52H1Q8NGJ2 320 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 OTOSQ8NHW6 89 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 GATAD2BQ8WXI9 593 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 PIGCQ92535 297 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 TMIGD2Q96BF3 282 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 WDFY2Q96P53 400 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 HIST1H2AAQ96QV6 131 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 TBX15Q96SF7 602 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 MICU1Q9BPX6 476 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 PAPOLGQ9BWT3 736 aaKnown RBP5.55□□□□□ -1.52
SCAF11-211ENST00000547950 C1orf21Q9H246 121 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 CNTD2Q9H8S5 307 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 RNPEPL1Q9HAU8 725 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 SNTG1Q9NSN8 517 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 DNAJB11Q9UBS4 358 aa5.55□□□□□ -1.52
SCAF11-211ENST00000547950 A0A1B0GW55 424 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 AQP12BA6NM10 295 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 ANXA2P2A6NMY6 339 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 SRRM5B3KS81 715 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 PSMD9O00233 223 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 NDUFB3O43676 98 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 FCN3O75636 299 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 ECDO95905 644 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DUX4L2P0CJ85 424 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DUX4L3P0CJ86 424 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DUX4L4P0CJ87 422 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DUX4L5P0CJ88 424 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DUX4L6P0CJ89 424 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DUX4L7P0CJ90 424 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 MMP9P14780 707 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 MUC1P15941 1255 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 MDKP21741 143 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 BPIFB3P59826 476 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 CBX1P83916 185 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 CDK5Q00535 292 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 IL5RAQ01344 420 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 PRB3Q04118 309 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 PRDX4Q13162 271 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 IKZF1Q13422 519 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 APOFQ13790 326 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 GK3PQ14409 553 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 PDCD1Q15116 288 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 SNAPC1Q16533 368 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DMRTC1Q5HYR2 192 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 WDR38Q5JTN6 314 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 TEX36Q5VZQ5 186 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DUX4L9Q6RFH8 374 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 FIP1L1Q6UN15 594 aaKnown RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 WDR82Q6UXN9 313 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 RHOUQ7L0Q8 258 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 KRT77Q7Z794 578 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 AQP12AQ8IXF9 295 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 GALNT4Q8N4A0 578 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 KIR3DL3Q8N743 410 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 FAM216BQ8N7L0 139 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 SCCPDHQ8NBX0 429 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 CSNK2A3Q8NEV1 391 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 BBS1Q8NFJ9 593 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 OR5P3Q8WZ94 311 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 RPL3LQ92901 407 aaKnown RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 UTP4Q969X6 686 aaKnown RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 RNF170Q96K19 258 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 FAM71F1Q96KD3 344 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-211ENST00000547950 LYZL4Q96KX0 146 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 TEX12Q9BXU0 123 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 RGCCQ9H4X1 137 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 YY1AP1Q9H869 796 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 NOX4Q9NPH5 578 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 ACOXLQ9NUZ1 547 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 TVP23BQ9NYZ1 205 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 ONECUT1Q9UBC0 465 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 DUX4Q9UBX2 424 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 LAMP5Q9UJQ1 280 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 KLHDC2Q9Y2U9 406 aa5.54□□□□□ -1.52
SCAF11-211ENST00000547950 ARHGAP32A7KAX9 2087 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 DYSFO75923 2080 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 IGHV1-69DA0A0B4J2H0 117 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 A0A0U1RQK1 487 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 TMEM269A0A1B0GVZ9 245 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 A0A1W2PRD5 423 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 A0A1W2PRF3 423 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 A0A1W2PRM7 423 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 ARRDC5A6NEK1 342 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-211ENST00000547950 GSC2O15499 205 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 AKR7A2O43488 359 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 FKBP6O75344 327 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 TIPRLO75663 272 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 CST4P01036 141 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 KNG1P01042 644 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 IGHV1-69P01742 117 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 TFF1P04155 84 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 MELTFP08582 738 aa5.53□□□□□ -1.52
SCAF11-211ENST00000547950 MRPL3P09001 348 aaKnown RBP5.53□□□□□ -1.52
SCAF11-211ENST00000547950 ANXA8P13928 327 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms