RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 PDCD5O14737 125 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 PGRMC2O15173 223 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 TO15178 435 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 TAPBPO15533 448 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SSNA1O43805 119 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 TMPRSS11DO60235 418 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 CREBL2O60519 120 aaPredicted RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 PLOD3O60568 738 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 ARL6IP5O75915 188 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 MPC2O95563 127 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 GPR75O95800 540 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 H1F0P07305 194 aaKnown RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 NMBP08949 121 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 PRR23D2P0DMB1 279 aaPredicted RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 MGMTP16455 207 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SPI1P17947 270 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 COX5AP20674 150 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 GATA3P23771 443 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 GIFP27352 417 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 PMELP40967 661 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SSR2P43308 183 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 ARFIP1P53367 373 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 CTBP2P56545 445 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 DSCR4P56555 118 aaPredicted RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 HOXC5Q00444 222 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 CDK6Q00534 326 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 PPP1R8Q12972 351 aaKnown RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SNTB2Q13425 540 aaKnown RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 GK2Q14410 553 aaPredicted RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 MAPK14Q16539 360 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 RNF212Q495C1 297 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 FAM76BQ5HYJ3 339 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 DNLZQ5SXM8 178 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 C22orf42Q6IC83 251 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 RPL13AP3Q6NVV1 102 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 CORO6Q6QEF8 472 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 CFAP77Q6ZQR2 320 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 ZER1Q7Z7L7 766 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 FBXL14Q8N1E6 418 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 KRT78Q8N1N4 520 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 LNX2Q8N448 690 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 FTMTQ8N4E7 242 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 KRTCAP2Q8N6L1 136 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF485Q8NCK3 441 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 BEND2Q8NDZ0 799 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 OR6S1Q8NH40 331 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 OR10D3Q8NH80 312 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 ABHD3Q8WU67 409 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 LINC00476Q8WZB0 136 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 NSMAFQ92636 917 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 THRSPQ92748 146 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 MARC2Q969Z3 335 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SGK3Q96BR1 496 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 WDR34Q96EX3 536 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 C1orf147Q96MC9 270 aaPredicted RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 C12orf57Q99622 126 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SLC6A7Q99884 636 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 NIPSNAP1Q9BPW8 284 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 INPP5KQ9BT40 448 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 RNF167Q9H6Y7 350 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 ZMAT3Q9HA38 289 aaKnown RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 CACYBPQ9HB71 228 aaKnown RBP5.69□□□□□ -1.5
CCDC60-205ENST00000546345 AMBNQ9NP70 447 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 A4GALTQ9NPC4 353 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 FANCFQ9NPI8 374 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 NUDT15Q9NV35 164 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 DNAJC11Q9NVH1 559 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 SLCO1C1Q9NYB5 712 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 TAS2R5Q9NYW4 299 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 EXTL2Q9UBQ6 330 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 TANC2Q9HCD6 1990 aa5.69□□□□□ -1.5
CCDC60-205ENST00000546345 A0A0A6YYD5 115 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 NCF1BA6NI72 391 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 NCF1CA8MVU1 366 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 C5orf58C9J3I9 102 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 MCRIP1C9JLW8 97 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 GABRPO00591 440 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 CXCL13O43927 109 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 TSPAN2O60636 221 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 HPGDSO60760 199 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 NME6O75414 186 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 GATBO75879 557 aaKnown RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 LYZL6O75951 148 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 PLGP00747 810 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 PDYNP01213 254 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 MELTFP08582 738 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 SLC35E2P0CK97 266 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 UQCRC2P22695 453 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 CHI3L1P36222 383 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 CDKN2CP42773 168 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 CCR9P51686 369 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 RAB4BP61018 213 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 SEC61A1P61619 476 aaKnown RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 TSPAN5P62079 268 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 SRSF4Q08170 494 aaKnown RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 ZNF155Q12901 538 aaPredicted RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 PDE7AQ13946 482 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 EXOSC7Q15024 291 aaKnown RBP5.68□□□□□ -1.5
CCDC60-205ENST00000546345 PPA1Q15181 289 aa5.68□□□□□ -1.5
CCDC60-205ENST00000546345 CNN3Q15417 329 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms