RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 METTL15A6NJ78 407 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 A6NLC8 198 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 DHRS7CA6NNS2 312 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 ZNF850A8MQ14 1090 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 TNFRSF13BO14836 293 aaPredicted RBP9.92□□□□□ -0.82
YBX3-217ENST00000546164 NDUFA2O43678 99 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 MTRF1O75570 445 aaKnown RBP9.92□□□□□ -0.82
YBX3-217ENST00000546164 DHRS3O75911 302 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 APOL3O95236 402 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 CCL1P22362 96 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 SRP14P37108 136 aaKnown RBP9.92□□□□□ -0.82
YBX3-217ENST00000546164 PSMB10P40306 273 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 ACTC1P68032 377 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 ACTA1P68133 377 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 LCN2P80188 198 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 PAX2Q02962 417 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 ZNF85Q03923 595 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 RIPPLY1Q0D2K3 151 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 BCL2L15Q5TBC7 163 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 LIPNQ5VXI9 398 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 TEX36Q5VZQ5 186 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 WDR82Q6UXN9 313 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 PLEKHG7Q6ZR37 379 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 C1orf229Q6ZS94 237 aaPredicted RBP9.92□□□□□ -0.82
YBX3-217ENST00000546164 ZNF826PQ6ZT77 177 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 ZNF771Q7L3S4 317 aaPredicted RBP9.92□□□□□ -0.82
YBX3-217ENST00000546164 NLRC3Q7RTR2 1065 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 ZDHHC23Q8IYP9 409 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 ENTHD1Q8IYW4 607 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 SEMA6DQ8NFY4 1073 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 HPSE2Q8WWQ2 592 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 PPP1R14AQ96A00 147 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 RNFT2Q96EX2 444 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 TBX5Q99593 518 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 SSBP3Q9BWW4 388 aaPredicted RBP9.92□□□□□ -0.82
YBX3-217ENST00000546164 FGF23Q9GZV9 251 aaPredicted RBP9.92□□□□□ -0.82
YBX3-217ENST00000546164 FAM118AQ9NWS6 357 aa9.92□□□□□ -0.82
YBX3-217ENST00000546164 ARHGAP32A7KAX9 2087 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 TRAV38-1A0A0B4J264 116 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 A0A1B0GTI1 187 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 OOEPA6NGQ2 149 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 TRAPPC2LH3BP13 241 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 DLGAP1O14490 977 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 AVPP01185 164 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 ZNF12P17014 697 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 CSNK2BP67870 215 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 TMEM42Q69YG0 159 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 C1QL2Q7Z5L3 287 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 COMMD2Q86X83 199 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 CATSPERDQ86XM0 798 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 EGFL6Q8IUX8 553 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 PACRGLQ8N7B6 248 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 YIPF7Q8N8F6 280 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 DEFB108BQ8NET1 73 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 OR8B3Q8NGG8 313 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 OR10Z1Q8NGY1 313 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 PIGCQ92535 297 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 RORBQ92753 470 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 DACT3Q96B18 629 aaPredicted RBP9.91□□□□□ -0.82
YBX3-217ENST00000546164 FAM71F1Q96KD3 344 aaPredicted RBP9.91□□□□□ -0.82
YBX3-217ENST00000546164 Q96MT0 163 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 OR8B2Q96RD0 313 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 MMP26Q9NRE1 261 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 SMPD3Q9NY59 655 aaPredicted RBP9.91□□□□□ -0.82
YBX3-217ENST00000546164 OR5V1Q9UGF6 321 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 OPN4Q9UHM6 478 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 ENPP5Q9UJA9 477 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 EXOGQ9Y2C4 368 aaKnown RBP9.91□□□□□ -0.82
YBX3-217ENST00000546164 PCDHGB1Q9Y5G3 927 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 INSIG2Q9Y5U4 225 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 V9GYS6 101 aa9.91□□□□□ -0.82
YBX3-217ENST00000546164 hCG_1807616A0A1W2PRN6 198 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 OR5B21A6NL26 309 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 SRRM5B3KS81 715 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.9□□□□□ -0.82
YBX3-217ENST00000546164 CDIPTO14735 213 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 PHF1O43189 567 aaPredicted RBP9.9□□□□□ -0.82
YBX3-217ENST00000546164 FSHBP01225 129 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 MUC1P15941 1255 aaPredicted RBP9.9□□□□□ -0.82
YBX3-217ENST00000546164 EGR1P18146 543 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 CD80P33681 288 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 PITPNBP48739 271 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 NPY4RP50391 375 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 GNB2P62879 340 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 GNG3P63215 75 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 HOXA4Q00056 320 aaPredicted RBP9.9□□□□□ -0.82
YBX3-217ENST00000546164 ZNF91Q05481 1191 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 SCGB2A2Q13296 93 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 RCN1Q15293 331 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 C11orf91Q3C1V1 193 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 CEACAM21Q3KPI0 293 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 CDONQ4KMG0 1287 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 WDR25Q64LD2 544 aaPredicted RBP9.9□□□□□ -0.82
YBX3-217ENST00000546164 LYPD2Q6UXB3 125 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 ZNF841Q6ZN19 808 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 DOK3Q7L591 496 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 FAM220AQ7Z4H9 259 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 KCTD20Q7Z5Y7 419 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 THAP5Q7Z6K1 395 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 FAM90A1Q86YD7 464 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms