RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 TMEM42Q69YG0 159 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 RPL22L1Q6P5R6 122 aaKnown RBP17.3■□□□□ 0.36
HMGA2-211ENST00000545998 CIARTQ8N365 385 aaPredicted RBP17.3■□□□□ 0.36
HMGA2-211ENST00000545998 ZNF676Q8N7Q3 588 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 OR8S1Q8NH09 359 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 TMUB1Q9BVT8 246 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 REG4Q9BYZ8 158 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 ERGIC3Q9Y282 383 aa17.3■□□□□ 0.36
HMGA2-211ENST00000545998 TRBV2A0A0J9YWF9 115 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 TMEM212A6NML5 194 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 RNF223E7ERA6 249 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 LMX1BO60663 402 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 ZNF12P17014 697 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 WNT4P56705 351 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 MZT1Q08AG7 82 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 IRF3Q14653 427 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 PRAMEF6Q5VXH4 476 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 ZDHHC23Q8IYP9 409 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 HPSE2Q8WWQ2 592 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 OR5P3Q8WZ94 311 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 PDCD1LG2Q9BQ51 273 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 TRIM36Q9NQ86 728 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 C14orf119Q9NWQ9 140 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 DCAF16Q9NXF7 216 aa17.29■□□□□ 0.36
HMGA2-211ENST00000545998 SIRT4Q9Y6E7 314 aaPredicted RBP17.29■□□□□ 0.36
HMGA2-211ENST00000545998 YLPM1P49750 1951 aaKnown RBP17.29■□□□□ 0.36
HMGA2-211ENST00000545998 A6NIN4 97 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 ANXA2P2A6NMY6 339 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 H7C1Q1 480 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 OGG1O15527 345 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 RGS10O43665 173 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 RBMXP38159 391 aaKnown RBP17.28■□□□□ 0.36
HMGA2-211ENST00000545998 DOC2BQ14184 412 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 MPPED2Q15777 294 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 MOGAT3Q86VF5 341 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 OR51A4Q8NGJ6 313 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 OR10AC1Q8NH08 325 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 OR5AK2Q8NH90 309 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 ZNF420Q8TAQ5 688 aaPredicted RBP17.28■□□□□ 0.36
HMGA2-211ENST00000545998 ERGIC1Q969X5 290 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 MICU1Q9BPX6 476 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 MND1Q9BWT6 205 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 FGF23Q9GZV9 251 aaPredicted RBP17.28■□□□□ 0.36
HMGA2-211ENST00000545998 TMEM106BQ9NUM4 274 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 BLOC1S6Q9UL45 172 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 HHLA2Q9UM44 414 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 TLN2Q9Y4G6 2542 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 TEP1Q99973 2627 aaKnown RBP17.28■□□□□ 0.36
HMGA2-211ENST00000545998 PPIHO43447 177 aaKnown RBP17.28■□□□□ 0.36
HMGA2-211ENST00000545998 PMELP40967 661 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 GPR6P46095 362 aaPredicted RBP17.28■□□□□ 0.36
HMGA2-211ENST00000545998 CLVS2Q5SYC1 327 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 PRSS48Q7RTY5 328 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 WDR86Q86TI4 376 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 Q8TCH9 128 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 C10orf35Q96D05 121 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 COX4I2Q96KJ9 171 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 COMMD4Q9H0A8 199 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 PLEKHA1Q9HB21 404 aa17.28■□□□□ 0.36
HMGA2-211ENST00000545998 LSM2Q9Y333 95 aaKnown RBP17.28■□□□□ 0.36
HMGA2-211ENST00000545998 CLDN25C9JDP6 229 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 IFNL4K9M1U5 179 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 NRASP01111 189 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 MT-ND2P03891 347 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 RPSAP08865 295 aaKnown RBP17.27■□□□□ 0.35
HMGA2-211ENST00000545998 THBS2P35442 1172 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 CDH15P55291 814 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 SLC3A1Q07837 685 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 ZNF181Q2M3W8 571 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 CEACAM21Q3KPI0 293 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 CEP78Q5JTW2 689 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 DMKNQ6E0U4 476 aaPredicted RBP17.27■□□□□ 0.35
HMGA2-211ENST00000545998 SMIM19Q96E16 107 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 RTL8AQ9BWD3 113 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 UFSP2Q9NUQ7 469 aa17.27■□□□□ 0.35
HMGA2-211ENST00000545998 CSPG4Q6UVK1 2322 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 GRPP07492 148 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 CD99P14209 185 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 TAS2R43P59537 309 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 ZNF154Q13106 437 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 FAM76BQ5HYJ3 339 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 PLCXD3Q63HM9 321 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 MOB3CQ70IA8 216 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 OR1M1Q8NGA1 313 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 RGP1Q92546 391 aaPredicted RBP17.26■□□□□ 0.35
HMGA2-211ENST00000545998 RNF170Q96K19 258 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 HIST1H2AAQ96QV6 131 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 FN3KRPQ9HA64 309 aa17.26■□□□□ 0.35
HMGA2-211ENST00000545998 IGHV4-61A0A0C4DH41 118 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 TMEM178BH3BS89 294 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 USF1P22415 310 aaPredicted RBP17.25■□□□□ 0.35
HMGA2-211ENST00000545998 LOXL1Q08397 574 aaPredicted RBP17.25■□□□□ 0.35
HMGA2-211ENST00000545998 DMRTC1Q5HYR2 192 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 ZFP41Q8N8Y5 198 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 MAPK1IP1LQ8NDC0 245 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 OR5A2Q8NGI9 324 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 OR13C3Q8NGS6 347 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 ADAT3Q96EY9 351 aaPredicted RBP17.25■□□□□ 0.35
HMGA2-211ENST00000545998 OR5M11Q96RB7 305 aa17.25■□□□□ 0.35
HMGA2-211ENST00000545998 YTHDF1Q9BYJ9 559 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms