RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 PLEKHA2Q9HB19 425 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 B3GAT1Q9P2W7 334 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 CYP8B1Q9UNU6 501 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 NCOA6Q14686 2063 aaPredicted RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 C5orf52A6NGY3 159 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 DEDDO75618 318 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 MT-ND4LP03901 98 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 SERPINA5P05154 406 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 ACAA1P09110 424 aaPredicted RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 PGA4P0DJD7 388 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 PGA3P0DJD8 388 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 ZNF17P17021 662 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 PI3P19957 117 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 CD80P33681 288 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 UCP2P55851 309 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 ZNF121P58317 390 aaPredicted RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 CLRN1P58418 232 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 GRB2P62993 217 aaKnown RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 RNF4P78317 190 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 RBM39Q14498 530 aaKnown RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 Q6ZRG5 221 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 FNDC9Q8TBE3 224 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 SLC25A43Q8WUT9 341 aaPredicted RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 RNF138Q8WVD3 245 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 SPACA5Q96QH8 159 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 TAAR9Q96RI9 348 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 GPER1Q99527 375 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 ZNF251Q9BRH9 671 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 TM2D1Q9BX74 207 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 ARV1Q9H2C2 271 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 PPP4R1LQ9P1A2 415 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 DHCR7Q9UBM7 475 aaKnown RBP7.72□□□□□ -1.17
TDP1-204ENST00000545686 STARD10Q9Y365 291 aa7.72□□□□□ -1.17
TDP1-204ENST00000545686 MYO9BQ13459 2157 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 HTR3BO95264 441 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 S100A9P06702 114 aaKnown RBP7.71□□□□□ -1.17
TDP1-204ENST00000545686 NAT2P11245 290 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 FOSL2P15408 326 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 RCC1P18754 421 aaPredicted RBP7.71□□□□□ -1.17
TDP1-204ENST00000545686 GLRA1P23415 457 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 PTGER4P35408 488 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 GABREP78334 506 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 FOXF1Q12946 379 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 IAH1Q2TAA2 248 aaPredicted RBP7.71□□□□□ -1.17
TDP1-204ENST00000545686 CHRFAM7AQ494W8 412 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 RNF144BQ7Z419 303 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 UEVLDQ8IX04 471 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 ZNF561Q8N587 486 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 OR51T1Q8NGJ9 327 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 LMX1AQ8TE12 382 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 HIST1H2BAQ96A08 127 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 MRGPRX4Q96LA9 322 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 PRRX2Q99811 253 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 CRB3Q9BUF7 120 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 PNRC2Q9NPJ4 139 aaKnown RBP7.71□□□□□ -1.17
TDP1-204ENST00000545686 SLC2A4RGQ9NR83 387 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 FAM212BQ9NTI7 297 aaPredicted RBP7.71□□□□□ -1.17
TDP1-204ENST00000545686 DECR2Q9NUI1 292 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 PRR13Q9NZ81 148 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 GSKIPQ9P0R6 139 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 FBXL17Q9UF56 701 aa7.71□□□□□ -1.17
TDP1-204ENST00000545686 KIAA1549Q9HCM3 1950 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 A0A1B0GX78 115 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 IFNA21P01568 189 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 IGLV3-1P01715 115 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 HPNP05981 417 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 CTSDP07339 412 aaPredicted RBP7.71□□□□□ -1.18
TDP1-204ENST00000545686 SFTPBP07988 381 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 HOXB5P09067 269 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 AGAP20933 346 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 MSX1P28360 303 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 FCGR2CP31995 323 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 THBS4P35443 961 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 DHPSP49366 369 aaPredicted RBP7.71□□□□□ -1.18
TDP1-204ENST00000545686 ARL4DP49703 201 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 SUCLG1P53597 346 aaKnown RBP7.71□□□□□ -1.18
TDP1-204ENST00000545686 SLC25A47Q6Q0C1 308 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 SLC16A14Q7RTX9 510 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 ZFP82Q8N141 532 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 OR9K2Q8NGE7 335 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 OR14K1Q8NGZ2 314 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 OR1L3Q8NH93 324 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 C14orf79Q96F83 325 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 EMC6Q9BV81 110 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 ST6GALNAC5Q9BVH7 336 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 PECRQ9BY49 303 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 METTL1Q9UBP6 276 aaKnown RBP7.71□□□□□ -1.18
TDP1-204ENST00000545686 ZMAT5Q9UDW3 170 aaKnown RBP7.71□□□□□ -1.18
TDP1-204ENST00000545686 CD207Q9UJ71 328 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 EDARQ9UNE0 448 aa7.71□□□□□ -1.18
TDP1-204ENST00000545686 CEP192Q8TEP8 1941 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 IGLV3-32A0A0A0MS00 114 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 A0A1W2PP11 408 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 CRYM-AS1A6NIL9 109 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 SEC11BP0C7V7 166 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 CPT2P23786 658 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 CTSSP25774 331 aa7.7□□□□□ -1.18
TDP1-204ENST00000545686 ZNF41P51814 821 aaPredicted RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 ZNF133P52736 654 aaPredicted RBP7.7□□□□□ -1.18
TDP1-204ENST00000545686 HGFACQ04756 655 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms