RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 ART1P52961 327 aa26.16■■□□□ 1.78
CCM2-219ENST00000544363 FBXL19-AS1Q494R0 122 aa26.16■■□□□ 1.78
CCM2-219ENST00000544363 XKRXQ6PP77 449 aa26.16■■□□□ 1.78
CCM2-219ENST00000544363 CRIP3Q6Q6R5 217 aa26.16■■□□□ 1.78
CCM2-219ENST00000544363 C1orf174Q8IYL3 243 aa26.16■■□□□ 1.78
CCM2-219ENST00000544363 GALNT11Q8NCW6 608 aa26.16■■□□□ 1.78
CCM2-219ENST00000544363 LILRB4Q8NHJ6 448 aa26.16■■□□□ 1.78
CCM2-219ENST00000544363 SYNPRQ8TBG9 265 aa26.16■■□□□ 1.78
CCM2-219ENST00000544363 PAPOLGQ9BWT3 736 aaKnown RBP26.16■■□□□ 1.78
CCM2-219ENST00000544363 CACNA1BQ00975 2339 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 ZNF850A8MQ14 1090 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 RAC2P15153 192 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 MADCAM1Q13477 382 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 PLCXD3Q63HM9 321 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 OR2T2Q6IF00 324 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 ANGPTL5Q86XS5 388 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 RAB40AQ8WXH6 277 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 SDHCQ99643 169 aaPredicted RBP26.15■■□□□ 1.78
CCM2-219ENST00000544363 SRRQ9GZT4 340 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 KCNK15Q9H427 330 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 RHBDL2Q9NX52 303 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 SLC7A11Q9UPY5 501 aa26.15■■□□□ 1.78
CCM2-219ENST00000544363 TMEM272A0A1B0GTI8 110 aa26.14■■□□□ 1.78
CCM2-219ENST00000544363 PPP3CBP16298 524 aa26.14■■□□□ 1.78
CCM2-219ENST00000544363 PLA2G7Q13093 441 aa26.14■■□□□ 1.78
CCM2-219ENST00000544363 IL18Q14116 193 aa26.14■■□□□ 1.78
CCM2-219ENST00000544363 PNLDC1Q8NA58 520 aaKnown RBP26.14■■□□□ 1.78
CCM2-219ENST00000544363 MARS2Q96GW9 593 aaKnown RBP26.14■■□□□ 1.78
CCM2-219ENST00000544363 CRIM1Q9NZV1 1036 aa26.14■■□□□ 1.78
CCM2-219ENST00000544363 GPR160Q9UJ42 338 aa26.14■■□□□ 1.78
CCM2-219ENST00000544363 ERRFI1Q9UJM3 462 aaPredicted RBP26.14■■□□□ 1.78
CCM2-219ENST00000544363 FAM90A27PA6NNH2 459 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 LDLRAD4O15165 306 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 BPNT1O95861 308 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 CRYAAP02489 173 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 OR3A4PP47883 348 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 PRDX4Q13162 271 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 AWAT2Q6E213 333 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 LHFPL2Q6ZUX7 228 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 PRR7Q8TB68 274 aa26.14■■□□□ 1.77
CCM2-219ENST00000544363 MRPS28Q9Y2Q9 187 aaKnown RBP26.14■■□□□ 1.77
CCM2-219ENST00000544363 FUT6P51993 359 aa26.13■■□□□ 1.77
CCM2-219ENST00000544363 MTCP1P56278 107 aa26.13■■□□□ 1.77
CCM2-219ENST00000544363 DTX3Q8N9I9 347 aa26.13■■□□□ 1.77
CCM2-219ENST00000544363 KLF14Q8TD94 323 aaPredicted RBP26.13■■□□□ 1.77
CCM2-219ENST00000544363 RFT1Q96AA3 541 aa26.13■■□□□ 1.77
CCM2-219ENST00000544363 HAVCR1Q96D42 359 aa26.13■■□□□ 1.77
CCM2-219ENST00000544363 BORCS8Q96FH0 119 aa26.13■■□□□ 1.77
CCM2-219ENST00000544363 CPNE2Q96FN4 548 aaPredicted RBP26.13■■□□□ 1.77
CCM2-219ENST00000544363 S100A16Q96FQ6 103 aaKnown RBP26.13■■□□□ 1.77
CCM2-219ENST00000544363 CCDC32Q9BV29 185 aa26.13■■□□□ 1.77
CCM2-219ENST00000544363 FAM230AA0A1W2PPH8 454 aa26.12■■□□□ 1.77
CCM2-219ENST00000544363 ANKRD30BLA7E2S9 258 aa26.12■■□□□ 1.77
CCM2-219ENST00000544363 VGLL3A8MV65 326 aa26.12■■□□□ 1.77
CCM2-219ENST00000544363 THBDP07204 575 aa26.12■■□□□ 1.77
CCM2-219ENST00000544363 RBP2P50120 134 aa26.12■■□□□ 1.77
CCM2-219ENST00000544363 EFNB2P52799 333 aa26.12■■□□□ 1.77
CCM2-219ENST00000544363 BHLHE23Q8NDY6 225 aa26.12■■□□□ 1.77
CCM2-219ENST00000544363 SELEP16581 610 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 PTGFRP43088 359 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 PITPNBP48739 271 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 TLE1Q04724 770 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 PYDC2Q56P42 97 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 MTFR2Q6P444 385 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 GLIPR1L1Q6UWM5 242 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 WFDC8Q8IUA0 241 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 SNX29P2Q8IUI4 249 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 ZDHHC23Q8IYP9 409 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 GDPD1Q8N9F7 314 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 RNASE6Q93091 150 aaKnown RBP26.11■■□□□ 1.77
CCM2-219ENST00000544363 PTX4Q96A99 478 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 ZC3HAV1LQ96H79 300 aaKnown RBP26.11■■□□□ 1.77
CCM2-219ENST00000544363 SPEF1Q9Y4P9 236 aa26.11■■□□□ 1.77
CCM2-219ENST00000544363 LILRA1O75019 489 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 UPK1BO75841 260 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 GNLYP22749 145 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 MPV17P39210 176 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 PSG7Q13046 419 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 MPC1Q9Y5U8 109 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 NBASA2RRP1 2371 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 ESPL1Q14674 2120 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 HEATR1Q9H583 2144 aaKnown RBP26.1■■□□□ 1.77
CCM2-219ENST00000544363 IGKV1-27A0A075B6S5 117 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 A0A0G2JMP0 313 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 A0A0X1KG70 313 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 CD40P25942 277 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 ALDH3B1P43353 468 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 ATP1B3P54709 279 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 QRFPP83859 136 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 IFITM3Q01628 133 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 IGFBP7Q16270 282 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 BAIAP2L2Q6UXY1 529 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 OR4M2Q8NGB6 313 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 OR5D18Q8NGL1 313 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 CA5BP1Q8WTZ4 195 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 C1orf147Q96MC9 270 aaPredicted RBP26.1■■□□□ 1.77
CCM2-219ENST00000544363 WFIKKN1Q96NZ8 548 aa26.1■■□□□ 1.77
CCM2-219ENST00000544363 MRPL15Q9P015 296 aaKnown RBP26.1■■□□□ 1.77
CCM2-219ENST00000544363 MYEF2Q9P2K5 600 aaKnown RBP26.1■■□□□ 1.77
CCM2-219ENST00000544363 NKX2-6A6NCS4 301 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms