RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 ZNF716A6NP11 495 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 MTRF1O75570 445 aaKnown RBP15.77■□□□□ 0.12
VIM-209ENST00000544301 SLC25A4P12235 298 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 FCGR2AP12318 317 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 MGMTP16455 207 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 VAMP1P23763 118 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 SSPNQ14714 243 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 RGS7BPQ6MZT1 257 aaPredicted RBP15.77■□□□□ 0.12
VIM-209ENST00000544301 SLC51BQ86UW2 128 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 ESX1Q8N693 406 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 RHBDD1Q8TEB9 315 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 CASTOR1Q8WTX7 329 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 SGK3Q96BR1 496 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 C10orf35Q96D05 121 aa15.77■□□□□ 0.12
VIM-209ENST00000544301 hCG_1807616A0A1W2PRN6 198 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 DUS4LO95620 317 aaKnown RBP15.77■□□□□ 0.11
VIM-209ENST00000544301 CRYGSP22914 178 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 AVPR2P30518 371 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 CBX5P45973 191 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 ARFRP1Q13795 201 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 C11orf87Q6NUJ2 197 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 SLC16A14Q7RTX9 510 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 GPR137CQ8N3F9 429 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 ARRDC1Q8N5I2 433 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 CCDC54Q8NEL0 328 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 OR10K1Q8NGX5 313 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 ROBO4Q8WZ75 1007 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 HAS2Q92819 552 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 RBPMSQ93062 196 aaKnown RBP15.77■□□□□ 0.11
VIM-209ENST00000544301 CXorf58Q96LI9 332 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 REG4Q9BYZ8 158 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 CRLF2Q9HC73 371 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.77■□□□□ 0.11
VIM-209ENST00000544301 DEPPQ9NTK1 212 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 COMMD9Q9P000 198 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 TMA7Q9Y2S6 64 aaKnown RBP15.77■□□□□ 0.11
VIM-209ENST00000544301 RTTNQ86VV8 2226 aa15.77■□□□□ 0.11
VIM-209ENST00000544301 ZDBF2Q9HCK1 2354 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 SGCEO43556 437 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 CXCL13O43927 109 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 STARP49675 285 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 RAB35Q15286 201 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 DBX2Q6ZNG2 339 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 OR52H1Q8NGJ2 320 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 LRRC20Q8TCA0 184 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 PPP1R1CQ8WVI7 109 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 PIGTQ969N2 578 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 ADGRG7Q96K78 797 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 MED9Q9NWA0 146 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 TNFSF18Q9UNG2 199 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 PCSK5Q92824 1860 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 A0A0D9SG52 128 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 POM121CA8CG34 1229 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 SYNGR3O43761 229 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 SERPINA7P05543 415 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 CST2P09228 141 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 SERPINA2P20848 420 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 ATP1B3P54709 279 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 TAS2R31P59538 309 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 LRRC37A5PQ49AS3 106 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 WIPI1Q5MNZ9 446 aaPredicted RBP15.76■□□□□ 0.11
VIM-209ENST00000544301 RFPL4BQ6ZWI9 263 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 KCTD9Q7L273 389 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 TMEM38BQ9NVV0 291 aa15.76■□□□□ 0.11
VIM-209ENST00000544301 CNTRLQ7Z7A1 2325 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 WDFY4Q6ZS81 3184 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 FAM25EA8MYX2 175 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 TRAPPC6AO75865 159 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 SPDEFO95238 335 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 AMY2BP19961 511 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 BLVRBP30043 206 aaPredicted RBP15.75■□□□□ 0.11
VIM-209ENST00000544301 NPY4RP50391 375 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 ZNF774Q6NX45 483 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 DRAM2Q6UX65 266 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 KCNRGQ8N5I3 272 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 OR5H2Q8NGV7 314 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 OR10D3Q8NH80 312 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 OR2V1Q8NHB1 315 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 CPT1CQ8TCG5 803 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 ST6GALNAC5Q9BVH7 336 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 TM2D1Q9BX74 207 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 PECRQ9BY49 303 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 NARFLQ9H6Q4 476 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 SDHAF2Q9NX18 166 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 P4HTMQ9NXG6 502 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 GPR132Q9UNW8 380 aa15.75■□□□□ 0.11
VIM-209ENST00000544301 MFSD2BA6NFX1 497 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 DBX1A6NMT0 343 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 CEACAM18A8MTB9 384 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 HPNP05981 417 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 CLDN15P56746 228 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 FAM209AQ5JX71 171 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 ABLIM2Q6H8Q1 611 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 RAB11FIP2Q7L804 512 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 AAED1Q7RTV5 226 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 TMEM105Q8N8V8 129 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 OR1F12Q8NHA8 337 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 S100A13Q99584 98 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 ZPBPQ9BS86 351 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 C5orf66Q9H5L9 145 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 442.1 ms