RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 KCNG3Q8TAE7 436 aa17.14■□□□□ 0.33
COPS7A-218ENST00000543939 ITFG2Q969R8 447 aa17.14■□□□□ 0.33
COPS7A-218ENST00000543939 NEURL2Q9BR09 285 aa17.14■□□□□ 0.33
COPS7A-218ENST00000543939 OPN3Q9H1Y3 402 aaPredicted RBP17.14■□□□□ 0.33
COPS7A-218ENST00000543939 GHRLQ9UBU3 117 aa17.14■□□□□ 0.33
COPS7A-218ENST00000543939 A0A1W2PR80 420 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 H7C417 338 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 PRSS3P35030 304 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 C1QL2Q7Z5L3 287 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 TMEM104Q8NE00 496 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 NEK6Q9HC98 313 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 MTFP1Q9UDX5 166 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 KCNN3Q9UGI6 736 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 ANKRD20A5PA0PJZ0 165 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 WIPF3A6NGB9 483 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 CDC14BO60729 498 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 IL2RAP01589 272 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 GSTT2BP0CG30 244 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 AP3S2P59780 193 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 ZP1P60852 638 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 GUCA2AQ02747 115 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 TBC1D28Q2M2D7 210 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 MRPL21Q7Z2W9 205 aaKnown RBP17.13■□□□□ 0.33
COPS7A-218ENST00000543939 MYPOPQ86VE0 399 aaPredicted RBP17.13■□□□□ 0.33
COPS7A-218ENST00000543939 WDR31Q8NA23 367 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 OR5D18Q8NGL1 313 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 TNFAIP8L1Q8WVP5 186 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 SLX1AQ9BQ83 275 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 NUDT16L1Q9BRJ7 211 aaKnown RBP17.13■□□□□ 0.33
COPS7A-218ENST00000543939 LPAR5Q9H1C0 372 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 POFUT1Q9H488 388 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 OPA3Q9H6K4 179 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 PTTG3PQ9NZH4 202 aa17.13■□□□□ 0.33
COPS7A-218ENST00000543939 MRPL15Q9P015 296 aaKnown RBP17.13■□□□□ 0.33
COPS7A-218ENST00000543939 SULT1C2O00338 296 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 RBBP9O75884 186 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 SCGNO76038 276 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 CELA3BP08861 270 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 CEACAM8P31997 349 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-218ENST00000543939 MTCP1P56278 107 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 SNTB2Q13425 540 aaKnown RBP17.12■□□□□ 0.33
COPS7A-218ENST00000543939 HLXQ14774 488 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-218ENST00000543939 P2RY6Q15077 328 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 LHFPL2Q6ZUX7 228 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 ZNF554Q86TJ5 538 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 CXorf67Q86X51 503 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-218ENST00000543939 OR56B2PQ8NGI1 322 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 GPX8Q8TED1 209 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 PIGCQ92535 297 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 TECTBQ96PL2 329 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 MARVELD1Q9BSK0 173 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 ING4Q9UNL4 249 aa17.12■□□□□ 0.33
COPS7A-218ENST00000543939 SPENQ96T58 3664 aaKnown RBP17.12■□□□□ 0.33
COPS7A-218ENST00000543939 BOD1L1Q8NFC6 3051 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 IGKV1-27A0A075B6S5 117 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 MPIG6BO95866 241 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 CBR1P16152 277 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 IDH3GP51553 393 aaPredicted RBP17.11■□□□□ 0.33
COPS7A-218ENST00000543939 C3P1Q6ZMU1 363 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 BEND4Q6ZU67 534 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 RFPL4BQ6ZWI9 263 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 MOB3CQ70IA8 216 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 CDH24Q86UP0 819 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 C17orf78Q8N4C9 275 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 AQP3Q92482 292 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 UPRTQ96BW1 309 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 CPNE2Q96FN4 548 aaPredicted RBP17.11■□□□□ 0.33
COPS7A-218ENST00000543939 TMEM59Q9BXS4 323 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 SCPEP1Q9HB40 452 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 HRASLSQ9HDD0 168 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 TUBD1Q9UJT1 453 aa17.11■□□□□ 0.33
COPS7A-218ENST00000543939 A0A0A6YYD4 124 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 A0A1W2PP11 408 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 FAM230AA0A1W2PPH8 454 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 ICMTO60725 284 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 MT-ND4P03905 459 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 VEGFCP49767 419 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 RBP2P50120 134 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 FUT6P51993 359 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 SSBP1Q04837 148 aaKnown RBP17.1■□□□□ 0.33
COPS7A-218ENST00000543939 ZNF260Q3ZCT1 412 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 SLC22A6Q4U2R8 563 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 OR5L1Q8NGL2 311 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 CHAC2Q8WUX2 184 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 CMBLQ96DG6 245 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 SNRNP40Q96DI7 357 aaKnown RBP17.1■□□□□ 0.33
COPS7A-218ENST00000543939 SEH1LQ96EE3 360 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 BORCS8Q96FH0 119 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 WBP1Q96G27 269 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 NICN1Q9BSH3 213 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 CST11Q9H112 138 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 DPAGT1Q9H3H5 408 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 BANF2Q9H503 90 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 J3QW42 95 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 CRTAPO75718 401 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-218ENST00000543939 CHRM2P08172 466 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 GLI4P10075 376 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 HOXC12P31275 282 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 FAM189A2Q15884 450 aa17.1■□□□□ 0.33
COPS7A-218ENST00000543939 C11orf91Q3C1V1 193 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms