RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 OR1J4Q8NGS1 313 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ABHD3Q8WU67 409 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 TSEN15Q8WW01 171 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 KISS1RQ969F8 398 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ARL11Q969Q4 196 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC25A38Q96DW6 304 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 TIMP4Q99727 224 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 HRH4Q9H3N8 390 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 PGPEP1Q9NXJ5 209 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 FBXO7Q9Y3I1 522 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A0B4J2E0 115 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A1B0GX12 115 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 OR5H14A6NHG9 310 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 PLPP2O43688 288 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 DDAH2O95865 285 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 IFNA21P01568 189 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 FUT1P19526 365 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 SRMP19623 302 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 GABRR1P24046 479 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 CDK2P24941 298 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 BDH1Q02338 343 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 C5orf64Q2M2E5 130 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 OR51S1Q8NGJ8 323 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 DVL3Q92997 716 aaPredicted RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ISOC2Q96AB3 205 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 DUSP23Q9BVJ7 150 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 FKRPQ9H9S5 495 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 RPS10P5Q9NQ39 176 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 UQCC1Q9NVA1 299 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 TBL2Q9Y4P3 447 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 FER1L5A0AVI2 2057 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 C17orf105B2RV13 164 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 BCL2L11O43521 198 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ARL6IP5O75915 188 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ARG1P05089 322 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 LIPCP11150 499 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 AGTR1P30556 359 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 F2RL1P55085 397 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 MLF1P58340 268 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 NR0B2Q15466 257 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 FNDC7Q5VTL7 733 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 GLT8D1Q68CQ7 371 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ADAM5Q6NVV9 412 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 MEPCEQ7L2J0 689 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC36A1Q7Z2H8 476 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 OR2G2Q8NGZ5 317 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 PFN4Q8NHR9 129 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF721Q8TF20 911 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 PTCHD1Q96NR3 888 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 PDCD1LG2Q9BQ51 273 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 SMCO4Q9NRQ5 59 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 C20orf141Q9NUB4 165 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF337Q9Y3M9 751 aa7.11□□□□□ -1.27
PDLIM5-221ENST00000542407 SPTBP11277 2137 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 ARID1BQ8NFD5 2236 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A1B0GX78 115 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A1W2PNV4 684 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 C20orf202A1L168 122 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 VSTM2BA6NLU5 285 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 FAM171A2A8MVW0 826 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 BLOC1S5-TXNDC5H3BN57 136 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 HOXB5P09067 269 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 ZGLP1P0C6A0 271 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 RCC1P18754 421 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 RAB6AP20340 208 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 HOXA5P20719 270 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 MAKP20794 623 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 PTGER4P35408 488 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 CEACAM3P40198 252 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 OR3A1P47881 315 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 CDX1P47902 265 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 NRG3P56975 720 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 SELENOTP62341 195 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 IL10RAQ13651 578 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC10A1Q14973 349 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 ELAVL1Q15717 326 aaKnown RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 NNATQ16517 81 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 GUK1Q16774 197 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 LINC00114Q6XXX2 140 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 GRINAQ7Z429 371 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 STEAP2Q8NFT2 490 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 OR4C16Q8NGL9 310 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 TERB2Q8NHR7 220 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 GRHL3Q8TE85 626 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 SMIM12Q96EX1 92 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 PGAM5Q96HS1 289 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 PGLYRP3Q96LB9 341 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 ANGPTL4Q9BY76 406 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 Q9N2J8 555 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 FGF21Q9NSA1 209 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 SUSD2Q9UGT4 822 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 SMPXQ9UHP9 88 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 CACNA1EQ15878 2313 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 A0A1B0GV72 72 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 H3BSH0 61 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 OGG1O15527 345 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 PRKNO60260 465 aaPredicted RBP7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 IL2RAP01589 272 aa7.1□□□□□ -1.27
PDLIM5-221ENST00000542407 NGFRP08138 427 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms