RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 MUS81Q96NY9 551 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 WFIKKN1Q96NZ8 548 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OXGR1Q96P68 337 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 FEVQ99581 238 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 NAA11Q9BSU3 229 aaPredicted RBP3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CENPOQ9BU64 300 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PRRG4Q9BZD6 226 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PLEKHF2Q9H8W4 249 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CACYBPQ9HB71 228 aaKnown RBP3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TMEM27Q9HBJ8 222 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 Q9N2K0 584 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TAS2R5Q9NYW4 299 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ACTR3BQ9P1U1 418 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 RIMS3Q9UJD0 308 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ZNF229Q9UJW7 825 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 RNF150Q9ULK6 438 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CLEC4AQ9UMR7 237 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PRPF19Q9UMS4 504 aaKnown RBP3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SAMD4AQ9UPU9 718 aaKnown RBP3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SH3GLB1Q9Y371 365 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ENPP4Q9Y6X5 453 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CUBNO60494 3623 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 DNHD1Q96M86 4753 aa3.35□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CR1P17927 2039 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 A0A087WUU8 490 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ARPC4-TTLL3A0A0A6YYG9 625 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OR6C65A6NJZ3 312 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CPSF4LA6NMK7 179 aaKnown RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ENO4A6NNW6 628 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 LRRN3E7EW58 273 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SPRY1O43609 319 aaPredicted RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 MRPL33O75394 65 aaKnown RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OR7A10O76100 309 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 IFNW1P05000 195 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 IGHV4-31P0DP07 118 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 IRF2P14316 349 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 NCK1P16333 377 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CCNA2P20248 432 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ATP6V1B2P21281 511 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PAX7P23759 505 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 MPZP25189 248 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OMPP47874 163 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OR2B6P58173 313 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 FXYD6P3P58550 94 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TLE4Q04727 773 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PRKCDQ05655 676 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ZNF415Q09FC8 603 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ST3GAL3Q11203 375 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TRAP1Q12931 704 aaKnown RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TAB1Q15750 504 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 GABRA6Q16445 453 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ANKDD1AQ495B1 522 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 IFI44LQ53G44 452 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TIMM23BQ5SRD1 257 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TSPO2Q5TGU0 170 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 LCN1P1Q5VSP4 162 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 GLYATQ6IB77 296 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ZNF770Q6IQ21 691 aaPredicted RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 FAM122BQ7Z309 247 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ATP6V1C2Q8NEY4 427 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 STEAP2Q8NFT2 490 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OR13C3Q8NGS6 347 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OR5J2Q8NH18 312 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OR52N5Q8NH56 324 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OR6X1Q8NH79 312 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PFN4Q8NHR9 129 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 VANGL1Q8TAA9 524 aaPredicted RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 LINC01560Q8TB33 94 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SLC7A13Q8TCU3 470 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SLC26A7Q8TE54 656 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TMEM239Q8WW34 195 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ACOT11Q8WXI4 607 aaPredicted RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 LZICQ8WZA0 190 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 POP5Q969H6 163 aaKnown RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 APH1AQ96BI3 265 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 S100PBPQ96BU1 408 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PYURFQ96I23 114 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 LURAP1Q96LR2 239 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ZNF75AQ96N20 296 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 OR2M2Q96R28 347 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 GPX7Q96SL4 187 aaPredicted RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TAPBPLQ9BX59 468 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 MRPL13Q9BYD1 178 aaKnown RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ACTR6Q9GZN1 396 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CXXC4Q9H2H0 198 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 NMNAT1Q9HAN9 279 aaPredicted RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 IL1RAPQ9NPH3 570 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TAS2R16Q9NYV7 291 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 RPS6KB2Q9UBS0 482 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 NOSIPQ9Y314 301 aaKnown RBP3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SLC25A15Q9Y619 301 aa3.34□□□□□ -1.87
SOX9-AS1-214ENST00000540802 MALRD1Q5VYJ5 2156 aa3.34□□□□□ -1.88
SOX9-AS1-214ENST00000540802 FN1P02751 2386 aaKnown RBP3.33□□□□□ -1.88
SOX9-AS1-214ENST00000540802 TRBV4-1A0A0J9YWV2 114 aa3.33□□□□□ -1.88
SOX9-AS1-214ENST00000540802 TCRBV3S1A0A5B6 114 aa3.33□□□□□ -1.88
SOX9-AS1-214ENST00000540802 SH3PXD2BA1X283 911 aa3.33□□□□□ -1.88
SOX9-AS1-214ENST00000540802 OR5H1A6NKK0 313 aa3.33□□□□□ -1.88
SOX9-AS1-214ENST00000540802 ZNF99A8MXY4 864 aaPredicted RBP3.33□□□□□ -1.88
SOX9-AS1-214ENST00000540802 EPM2AB3EWF7 344 aa3.33□□□□□ -1.88
SOX9-AS1-214ENST00000540802 SHISA9B4DS77 424 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms