RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 FBP1P09467 338 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 H2BFMP0C1H6 154 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 SELLP14151 372 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 TGM4P49221 684 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 MNAT1P51948 309 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 PROK1P58294 105 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 GMFBP60983 142 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 SNCBQ16143 134 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 TAF9Q16594 264 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 FAM98BQ52LJ0 330 aaKnown RBP11.61□□□□□ -0.55
SNHG1-213ENST00000540725 LRRC10Q5BKY1 277 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 ATPAF1Q5TC12 328 aaPredicted RBP11.61□□□□□ -0.55
SNHG1-213ENST00000540725 ASPHD2Q6ICH7 369 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 CD300LDQ6UXZ3 194 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 GDPGP1Q6ZNW5 385 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 PIGWQ7Z7B1 504 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 DHFR2Q86XF0 187 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 TIGD4Q8IY51 512 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 ZSCAN4Q8NAM6 433 aaPredicted RBP11.61□□□□□ -0.55
SNHG1-213ENST00000540725 OR10G2Q8NGC3 310 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 OR5T2Q8NGG2 359 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 OR10Z1Q8NGY1 313 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 NPRL2Q8WTW4 380 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 NIPSNAP1Q9BPW8 284 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 DCTN5Q9BTE1 182 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 RTL8AQ9BWD3 113 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 MUC13Q9H3R2 512 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 HAO2Q9NYQ3 351 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 ZNRD1Q9P1U0 126 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 DNAJB11Q9UBS4 358 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 CAB39Q9Y376 341 aaPredicted RBP11.61□□□□□ -0.55
SNHG1-213ENST00000540725 MPC1Q9Y5U8 109 aa11.61□□□□□ -0.55
SNHG1-213ENST00000540725 TET2Q6N021 2002 aaPredicted RBP11.61□□□□□ -0.55
SNHG1-213ENST00000540725 NKX6-3A6NJ46 265 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 B2RBV5 119 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 RNASEK-C17orf49H0YIS7 233 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 H3BN98 237 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 PAICSP22234 425 aaKnown RBP11.6□□□□□ -0.55
SNHG1-213ENST00000540725 ACKR3P25106 362 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 DLX1P56177 255 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 GNGT1P63211 74 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 GUCA2AQ02747 115 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 PRB3Q04118 309 aaPredicted RBP11.6□□□□□ -0.55
SNHG1-213ENST00000540725 PRDX4Q13162 271 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 KLRD1Q13241 179 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 Q6ZSV7 163 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.6□□□□□ -0.55
SNHG1-213ENST00000540725 ARHGAP24Q8N264 748 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 Q8N7P7 452 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 H1FXQ92522 213 aaKnown RBP11.6□□□□□ -0.55
SNHG1-213ENST00000540725 RPL3LQ92901 407 aaKnown RBP11.6□□□□□ -0.55
SNHG1-213ENST00000540725 RAB3IPQ96QF0 476 aaPredicted RBP11.6□□□□□ -0.55
SNHG1-213ENST00000540725 RBM4BQ9BQ04 359 aaKnown RBP11.6□□□□□ -0.55
SNHG1-213ENST00000540725 DNTTIP1Q9H147 329 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 WDR13Q9H1Z4 485 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 OR51V1Q9H2C8 321 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 ABCB9Q9NP78 766 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 SNTG1Q9NSN8 517 aa11.6□□□□□ -0.55
SNHG1-213ENST00000540725 A0A1W2PRD5 423 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 A0A1W2PRF3 423 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 A0A1W2PRM7 423 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 BTBD17A6NE02 478 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 TMEM210A6NLX4 147 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 ZNF850A8MQ14 1090 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 NPFFO15130 113 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 LYNP07948 512 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 EEF1B2P24534 225 aaKnown RBP11.59□□□□□ -0.55
SNHG1-213ENST00000540725 GYS2P54840 703 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 MS4A2Q01362 244 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 TRIM25Q14258 630 aaKnown RBP11.59□□□□□ -0.55
SNHG1-213ENST00000540725 DHRS7BQ6IAN0 325 aaPredicted RBP11.59□□□□□ -0.55
SNHG1-213ENST00000540725 ZNF788Q6ZQV5 615 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 KCTD8Q6ZWB6 473 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 OTOSQ8NHW6 89 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 GIPC3Q8TF64 312 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 OR5P3Q8WZ94 311 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 UBE2FQ969M7 185 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 GAFA1Q96PS6 74 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 FEVQ99581 238 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 PKP2Q99959 881 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 FGF23Q9GZV9 251 aaPredicted RBP11.59□□□□□ -0.55
SNHG1-213ENST00000540725 TCF7L1Q9HCS4 588 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 ZNF391Q9UJN7 358 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 VPREB3Q9UKI3 123 aa11.59□□□□□ -0.55
SNHG1-213ENST00000540725 NOTCH3Q9UM47 2321 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 PRR23D1E9PI22 279 aaPredicted RBP11.58□□□□□ -0.56
SNHG1-213ENST00000540725 AKR7A2O43488 359 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 SELENOFO60613 162 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 CST4P01036 141 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 TFF1P04155 84 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 PRR23D2P0DMB1 279 aaPredicted RBP11.58□□□□□ -0.56
SNHG1-213ENST00000540725 GABPB1Q06547 395 aaPredicted RBP11.58□□□□□ -0.56
SNHG1-213ENST00000540725 GK3PQ14409 553 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 DGUOKQ16854 277 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 ANGPTL6Q8NI99 470 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 THEM6Q8WUY1 208 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 HPSE2Q8WWQ2 592 aa11.58□□□□□ -0.56
SNHG1-213ENST00000540725 PIGCQ92535 297 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms