RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 NAT1P18440 290 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 SCAND1P57086 179 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 MPPED2Q15777 294 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 SNAI3Q3KNW1 292 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 YRDCQ86U90 279 aaKnown RBP12.42□□□□□ -0.42
INO80E-203ENST00000540562 MR1Q95460 341 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 B3GALT1Q9Y5Z6 326 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 XRCC2O43543 280 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 GP1BAP07359 652 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 ADCYAP1P18509 176 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 CHRFAM7AQ494W8 412 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 PHLDA2Q53GA4 152 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 THRSPQ92748 146 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 LYZL4Q96KX0 146 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 FAAP24Q9BTP7 215 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 RNF126Q9BV68 326 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 EDEM2Q9BV94 578 aa12.42□□□□□ -0.42
INO80E-203ENST00000540562 ALX4Q9H161 411 aaPredicted RBP12.42□□□□□ -0.42
INO80E-203ENST00000540562 TEX13DA0A0J9YY54 714 aaPredicted RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 DNASE2O00115 360 aaPredicted RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 ATG12O94817 140 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 DIRAS3O95661 229 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 BPNT1O95861 308 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 HPNP05981 417 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 ACY1Q03154 408 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 ZNF468Q5VIY5 522 aaPredicted RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 RPL7L1Q6DKI1 246 aaKnown RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 HSD17B13Q7Z5P4 300 aaPredicted RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 AKR7LQ8NHP1 331 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 SPSB2Q99619 263 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 MRPL13Q9BYD1 178 aaKnown RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 TLNRD1Q9H1K6 362 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 BARX1Q9HBU1 254 aaPredicted RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 PTRH2Q9Y3E5 179 aaKnown RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 ZFAND5O76080 213 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 PTGDSP41222 190 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 TGIF1Q15583 401 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 THEM4Q5T1C6 240 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 TFAP2EQ6VUC0 442 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 LYPD6Q86Y78 171 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 TMEM156Q8N614 296 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 C20orf24Q9BUV8 137 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 OR10A2Q9H208 303 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 SLCO5A1Q9H2Y9 848 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 PLEKHJ1Q9NW61 149 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 CACNA1DQ01668 2161 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 A0A0A6YYH2 397 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 IGHV5-10-1A0A0J9YXX1 117 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 A6NJ64 397 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 DHRS7CA6NNS2 312 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 TMEM14DPA8MWL7 114 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 LRP3O75074 770 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 OR2F2O95006 317 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 CD8AP01732 235 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 B4GALT1P15291 398 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 CSNK1A1P48729 337 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 SUPT4H1P63272 117 aaKnown RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 OR2F1Q13607 317 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 HAGHLQ6PII5 290 aaPredicted RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 PPP1R3BQ86XI6 285 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 PLPP5Q8NEB5 264 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 SLC25A32Q9H2D1 315 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 LDAHQ9H6V9 325 aa12.41□□□□□ -0.42
INO80E-203ENST00000540562 NXT1Q9UKK6 140 aaKnown RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 MCTS1Q9ULC4 181 aaKnown RBP12.41□□□□□ -0.42
INO80E-203ENST00000540562 KIAA2026Q5HYC2 2103 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 CNOT1A5YKK6 2376 aaKnown RBP12.4□□□□□ -0.42
INO80E-203ENST00000540562 LOC390937A0A1W2PQ73 354 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 HSPB2A8KAH6 182 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 NPIPA2E9PIF3 369 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 NPIPA3F8WFD2 350 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 DUS4LO95620 317 aaKnown RBP12.4□□□□□ -0.42
INO80E-203ENST00000540562 IGHMP01871 453 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 PRKACAP17612 351 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 HSPB2Q16082 182 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 H3F3CQ6NXT2 135 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 C1orf147Q96MC9 270 aaPredicted RBP12.4□□□□□ -0.42
INO80E-203ENST00000540562 CDC6Q99741 560 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 ZNF2Q9BSG1 426 aaPredicted RBP12.4□□□□□ -0.42
INO80E-203ENST00000540562 PHF7Q9BWX1 381 aaPredicted RBP12.4□□□□□ -0.42
INO80E-203ENST00000540562 IGHV3-64DA0A0J9YX35 117 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 TRAPPC6AO75865 159 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 CCL2P13500 99 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 SHBQ15464 509 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 MOB3CQ70IA8 216 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 Q7L0L9 218 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 OR2M3Q8NG83 312 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 KCNG3Q8TAE7 436 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 SPACA9Q96E40 222 aaPredicted RBP12.4□□□□□ -0.42
INO80E-203ENST00000540562 PCDHGA1Q9Y5H4 931 aa12.4□□□□□ -0.42
INO80E-203ENST00000540562 A0A0G2JMM0 328 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 A0A1W2PPB8 328 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 A0A1W2PRS3 328 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 KIR3DP1A8MWS1 328 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 NPBWR1P48145 328 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 MTCP1P56278 107 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 PCK2Q16822 640 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 TMEM128Q5BJH2 165 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 HOGA1Q86XE5 327 aa12.39□□□□□ -0.43
INO80E-203ENST00000540562 PIK3IP1Q96FE7 263 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms