RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 GMPPBQ9Y5P6 360 aa12.57□□□□□ -0.4
UBE3B-212ENST00000540230 PPIAL4CA0A0B4J2A2 164 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF816-ZNF321PA0A0X1KG74 233 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 A0A1B0GTI1 187 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 OOEPA6NGQ2 149 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 ANXA2P2A6NMY6 339 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 H3BSH0 61 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-212ENST00000540230 J3QLI3 93 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 J3QRE1 110 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 P2RY10O00398 339 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 TNFRSF13BO14836 293 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-212ENST00000540230 KRT8P05787 483 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF12P17014 697 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 ATP6V1E1P36543 226 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 MAP2K3P46734 347 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 MTNR1AP48039 350 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 PITPNBP48739 271 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 GNB2P62879 340 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 IL5RAQ01344 420 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 MZT1Q08AG7 82 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 TMED1Q13445 227 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 OCLNQ16625 522 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 SLC25A30Q5SVS4 291 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 BCL2L15Q5TBC7 163 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 KRT74Q7RTS7 529 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 FAM90A1Q86YD7 464 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 ZDHHC23Q8IYP9 409 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 ELMOD2Q8IZ81 293 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 FTMTQ8N4E7 242 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 SEMA6DQ8NFY4 1073 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 OR8B3Q8NGG8 313 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 RORBQ92753 470 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 STMN2Q93045 179 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 RNF166Q96A37 237 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-212ENST00000540230 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-212ENST00000540230 RNFT2Q96EX2 444 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 OR8B2Q96RD0 313 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 MICU1Q9BPX6 476 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 RTL8AQ9BWD3 113 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 MOB1AQ9H8S9 216 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 INSIG2Q9Y5U4 225 aa12.56□□□□□ -0.4
UBE3B-212ENST00000540230 A0A1B0GW55 424 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 A6NIN4 97 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 METTL15A6NJ78 407 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DHRS3O75911 302 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 FSHBP01225 129 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 GYPAP02724 150 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DUX4L2P0CJ85 424 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DUX4L3P0CJ86 424 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DUX4L4P0CJ87 422 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DUX4L5P0CJ88 424 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DUX4L6P0CJ89 424 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DUX4L7P0CJ90 424 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 GATA3P23771 443 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 ISL1P61371 349 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 SNCBQ16143 134 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 ZSCAN26Q16670 478 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 ODF4Q2M2E3 257 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 TP53I3Q53FA7 332 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 WDR25Q64LD2 544 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DUX4L9Q6RFH8 374 aaPredicted RBP12.55□□□□□ -0.4
UBE3B-212ENST00000540230 C1QL2Q7Z5L3 287 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 RNF170Q96K19 258 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 RNPEPL1Q9HAU8 725 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 SMURF1Q9HCE7 757 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 ACOXLQ9NUZ1 547 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 FAM118AQ9NWS6 357 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 DUX4Q9UBX2 424 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBE3B-212ENST00000540230 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 SNX5Q9Y5X3 404 aa12.55□□□□□ -0.4
UBE3B-212ENST00000540230 LOC100130705A0A1B0GUX0 176 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 C22orf46C9J442 243 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 RGS9O75916 674 aaPredicted RBP12.54□□□□□ -0.4
UBE3B-212ENST00000540230 GPM6AP51674 278 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 GMFBP60983 142 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 RIPPLY1Q0D2K3 151 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 LRRC36Q1X8D7 754 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 KRTAP24-1Q3LI83 254 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 FAM76BQ5HYJ3 339 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 MEDAGQ5VYS4 303 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 TEX36Q5VZQ5 186 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 LPCAT4Q643R3 524 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 KCTD8Q6ZWB6 473 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 CATSPERDQ86XM0 798 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 SCCPDHQ8NBX0 429 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 OR14K1Q8NGZ2 314 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 APH1BQ8WW43 257 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 WDR13Q9H1Z4 485 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 RASSF4Q9H2L5 321 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 CLN8Q9UBY8 286 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 OR5V1Q9UGF6 321 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 V9GYS6 101 aa12.54□□□□□ -0.4
UBE3B-212ENST00000540230 TRAV38-1A0A0B4J264 116 aa12.53□□□□□ -0.4
UBE3B-212ENST00000540230 TMEM210A6NLX4 147 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms