RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PGAP1Q75T13 922 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 LRRC46Q96FV0 321 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 RTBDNQ9BSG5 229 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 SRXN1Q9BYN0 137 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 EHFQ9NZC4 300 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 PIGLQ9Y2B2 252 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 NBEAQ8NFP9 2946 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 A0A0D9SG52 128 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 MFNGO00587 321 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 CD63P08962 238 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 AGTR1P30556 359 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 CSNK1A1P48729 337 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 RRADP55042 308 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 CSNK2A1P68400 391 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 SNTB1Q13884 538 aaKnown RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 AADACL3Q5VUY0 350 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 MRPL14Q6P1L8 145 aaKnown RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 ZDHHC22Q8N966 263 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 CSNK2A3Q8NEV1 391 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 EDAQ92838 391 aa12.34□□□□□ -0.43
UBE3B-210ENST00000539599 MYOZ1Q9NP98 299 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 MCTS1Q9ULC4 181 aaKnown RBP12.34□□□□□ -0.43
UBE3B-210ENST00000539599 PMS2P1A4D2B8 440 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 KRBOX1C9JBD0 128 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 ATP6V1G2-DDX39BF2Z307 99 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 DUS4LO95620 317 aaKnown RBP12.33□□□□□ -0.44
UBE3B-210ENST00000539599 FGL1Q08830 312 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 HIST3H3Q16695 136 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 CCDC157Q569K6 752 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 TMEM88Q6PEY1 159 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 MOB3CQ70IA8 216 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 HSD17B13Q7Z5P4 300 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-210ENST00000539599 YRDCQ86U90 279 aaKnown RBP12.33□□□□□ -0.44
UBE3B-210ENST00000539599 FADS6Q8N9I5 356 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 INO80EQ8NBZ0 244 aaPredicted RBP12.33□□□□□ -0.44
UBE3B-210ENST00000539599 KCNG3Q8TAE7 436 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 IFI44Q8TCB0 444 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 FBXO17Q96EF6 278 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 PCED1AQ9H1Q7 454 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 FANCFQ9NPI8 374 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 PLEK2Q9NYT0 353 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 DOCK7Q96N67 2140 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 NCKAP5O14513 1909 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 GPR31O00270 319 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 SLC25A4P12235 298 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 CNR1P21554 472 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 ACKR3P25106 362 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 PSMB6P28072 239 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 PTGFRP43088 359 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 HDDC2Q7Z4H3 204 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 OR5AP2Q8NGF4 316 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 OR5H2Q8NGV7 314 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 OR10A2Q9H208 303 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 MED9Q9NWA0 146 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 GPR132Q9UNW8 380 aa12.33□□□□□ -0.44
UBE3B-210ENST00000539599 FREM1Q5H8C1 2179 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 A0A0J9YW62 118 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 DBX1A6NMT0 343 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 OR2F2O95006 317 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 IGHV3-9P01782 118 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 MSX1P28360 303 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 S100A10P60903 97 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 MC2RQ01718 297 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 OR2F1Q13607 317 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 LPAL2Q16609 132 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 PLEKHN1Q494U1 663 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-210ENST00000539599 TFAP2EQ6VUC0 442 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 ALKBH3Q96Q83 286 aaPredicted RBP12.32□□□□□ -0.44
UBE3B-210ENST00000539599 FAM117AQ9C073 453 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 SLC25A32Q9H2D1 315 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 DHRS7CA6NNS2 312 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 ZIC3O60481 467 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 OPRM1P35372 400 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 RAB32Q13637 225 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 DOK3Q7L591 496 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 DTWD2Q8NBA8 298 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 SIT1Q9Y3P8 196 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 HS3ST3B1Q9Y662 390 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 SHANK1Q9Y566 2161 aa12.32□□□□□ -0.44
UBE3B-210ENST00000539599 DSPP15924 2871 aaKnown RBP12.32□□□□□ -0.44
UBE3B-210ENST00000539599 IGLV3-32A0A0A0MS00 114 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 FAM230AA0A1W2PPH8 454 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 ACTL6AO96019 429 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 GP1BAP07359 652 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 SFTPBP07988 381 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 ADCYAP1P18509 176 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 RCC1P18754 421 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-210ENST00000539599 MSR1P21757 451 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 OR3A2P47893 321 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
UBE3B-210ENST00000539599 Q7L0L9 218 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 LIME1Q9H400 295 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 METTL8Q9H825 291 aaKnown RBP12.31□□□□□ -0.44
UBE3B-210ENST00000539599 FLVCR1Q9Y5Y0 555 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 IGHV1-45A0A0A0MS14 117 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 NPIPA2E9PIF3 369 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 NPIPA3F8WFD2 350 aa12.31□□□□□ -0.44
UBE3B-210ENST00000539599 COX6A1P12074 109 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms