RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 FBXO24O75426 580 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 CA11O75493 328 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 MED6O75586 246 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 CST4P01036 141 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 SPP1P10451 314 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 SLC2A1P11166 492 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 FOLR2P14207 255 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 PRF1P14222 555 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 SNU13P55769 128 aaKnown RBP8.52□□□□□ -1.05
CDH13-204ENST00000539548 CFHR1Q03591 330 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 MFAP5Q13361 173 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 PEA15Q15121 130 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 TMEM268Q5VZI3 342 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 PLXDC1Q8IUK5 500 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 APCDD1LQ8NCL9 501 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 OR51T1Q8NGJ9 327 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 OR14K1Q8NGZ2 314 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 CNTNAP3Q9BZ76 1288 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 TGIF2Q9GZN2 237 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 PNRC2Q9NPJ4 139 aaKnown RBP8.52□□□□□ -1.05
CDH13-204ENST00000539548 PARP11Q9NR21 331 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 EHFQ9NZC4 300 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 GSKIPQ9P0R6 139 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 FBXO9Q9UK97 447 aaPredicted RBP8.52□□□□□ -1.05
CDH13-204ENST00000539548 CDH23Q9H251 3354 aa8.52□□□□□ -1.05
CDH13-204ENST00000539548 GON4LQ3T8J9 2241 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 IGHV1OR15-9A0A0B4J2B8 117 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 SHISA8B8ZZ34 492 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 HTR3BO95264 441 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 FARS2O95363 451 aaKnown RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 GAPDHP04406 335 aaKnown RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 HOXB5P09067 269 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 SFTA3P0C7M3 94 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 NAT2P11245 290 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ZNF708P17019 499 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 CTSSP25774 331 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 PAX6P26367 422 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ADH6P28332 368 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 CDAP32320 146 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 PTGFRP43088 359 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ZNF84P51523 738 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ECH1Q13011 328 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 DEFB119Q8N690 84 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 OR6X1Q8NH79 312 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 POC1BQ8TC44 478 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 CYYR1Q96J86 154 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 USB1Q9BQ65 265 aaKnown RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 CMSS1Q9BQ75 279 aaKnown RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 PECRQ9BY49 303 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 CHRDQ9H2X0 955 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 RNF122Q9H9V4 155 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 SLC22A11Q9NSA0 550 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ASH2LQ9UBL3 628 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ATPIF1Q9UII2 106 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 IGLV3-32A0A0A0MS00 114 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 METTL12A8MUP2 240 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 RER1O15258 196 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 TRAF3IP2O43734 574 aaPredicted RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 IFNA2P01563 188 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 APOC1P02654 83 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 NME2P22392 152 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ANOS1P23352 680 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 BLVRBP30043 206 aaPredicted RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 RPL12P30050 165 aaKnown RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 ECI1P42126 302 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 KCNJ3P48549 501 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 MEOX2P50222 304 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ZNF41P51814 821 aaPredicted RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 DVL1P1P54792 670 aaPredicted RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 S100A10P60903 97 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 HNRNPKP61978 463 aaKnown RBP eCLIP8.51□□□□□ -1.05
CDH13-204ENST00000539548 GRB2P62993 217 aaKnown RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 RBM39Q14498 530 aaKnown RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 ARL6IP1Q15041 203 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 PPA1Q15181 289 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 KISS1Q15726 138 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 HIST3H3Q16695 136 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 PLPPR5Q32ZL2 321 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 CHRFAM7AQ494W8 412 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 FAM76BQ5HYJ3 339 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 RTL6Q6ICC9 239 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 CRIP3Q6Q6R5 217 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 SHISA6Q6ZSJ9 500 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 FAM57BQ71RH2 274 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 SYT13Q7L8C5 426 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ANKRD37Q7Z713 158 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 ZNF283Q8N7M2 679 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 PNLDC1Q8NA58 520 aaKnown RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 LYPD6BQ8NI32 183 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 THAP3Q8WTV1 239 aaPredicted RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 ZNF501Q96CX3 271 aaPredicted RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 CPNE2Q96FN4 548 aaPredicted RBP8.51□□□□□ -1.05
CDH13-204ENST00000539548 EGLN1Q9GZT9 426 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 SMCO4Q9NRQ5 59 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 C1orf123Q9NWV4 160 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 PPP4R1LQ9P1A2 415 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 LHX6Q9UPM6 363 aa8.51□□□□□ -1.05
CDH13-204ENST00000539548 C14orf166Q9Y224 244 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms