RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 OR10G3Q8NGC4 313 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 RNF138Q8WVD3 245 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 THRSPQ92748 146 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 MRPL13Q9BYD1 178 aaKnown RBP11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 SEC61A2Q9H9S3 476 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 PLA2G2EQ9NZK7 142 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 RFNGQ9Y644 331 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 A0A1W2PQM1 296 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 RAB19A4D1S5 217 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 METTL21EPA6NDL7 271 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 A6NIZ1 184 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 SLC33A1O00400 549 aaPredicted RBP11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 CDAP32320 146 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 P2RY4P51582 365 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 EMP2P54851 167 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 RAP1BP61224 184 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 RAP1AP62834 184 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 PJVKQ0ZLH3 352 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 MYBPHQ13203 477 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 CARD17Q5XLA6 110 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 GUSBP11Q6P575 273 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 DHRS11Q6UWP2 260 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 KMT5CQ86Y97 462 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 SLAMF6Q96DU3 332 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 EDEM2Q9BV94 578 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 UBE2ZQ9H832 354 aaPredicted RBP11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 GSN-AS1Q9NRJ2 163 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 GHRLQ9UBU3 117 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 LY6G6EA0A0G2JKS1 128 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 COLCA2A8K830 154 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 H2BFMP0C1H6 154 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 DAP3P51398 398 aaKnown RBP11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 MMP16P51512 607 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 QRFPP83859 136 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 C5orf46Q6UWT4 87 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 PGAP1Q75T13 922 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 MISPQ8IVT2 679 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 OR6S1Q8NH40 331 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 FAM71F1Q96KD3 344 aaPredicted RBP11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 C5orf66Q9H5L9 145 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 RCC2Q9P258 522 aaKnown RBP11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 KLHL13Q9P2N7 655 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 U3KQA8 63 aa11.09□□□□□ -0.63
SFSWAP-208ENST00000539506 A0A1W2PNR3 127 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 A0A1W2PPH5 198 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 RAD51DO75771 328 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 MELTFP08582 738 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 CD79AP11912 226 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 POLR2GP62487 172 aaKnown RBP eCLIP11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 PLPPR5Q32ZL2 321 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 OR51E1Q8TCB6 317 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 AQP3Q92482 292 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 BSCL2Q96G97 398 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 ELL3Q9HB65 397 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF319Q9P2F9 582 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 LSM5Q9Y4Y9 91 aaKnown RBP11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 LHFPL6Q9Y693 200 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 ETV2O00321 342 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 FGF16O43320 207 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 OR2J2O76002 312 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 LY86O95711 162 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF44P15621 663 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 OR3A4PP47883 348 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF616Q08AN1 781 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 EIF2S3LQ2VIR3 472 aaKnown RBP11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 FAM24BQ8N5W8 94 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 TMEM230Q96A57 120 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 DDIT4LQ96D03 193 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 JSRP1Q96MG2 331 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 PBOV1Q9GZY1 135 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 KLRF1Q9NZS2 232 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 MIOXQ9UGB7 285 aa11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 RCL1Q9Y2P8 373 aaKnown RBP11.08□□□□□ -0.64
SFSWAP-208ENST00000539506 ATXN7O15265 892 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 S100A9P06702 114 aaKnown RBP11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 H2AFB1P0C5Y9 115 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF14P17017 642 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 SSBP1Q04837 148 aaKnown RBP11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF385CQ66K41 422 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 TAF9BQ9HBM6 251 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 A0A0A6YYD4 124 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 VSTM2BA6NLU5 285 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 K7ESF4 209 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 SYT7O43581 403 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 SCRG1O75711 98 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 DHPSP49366 369 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 STARD6P59095 220 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 SP6Q3SY56 376 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 PLAC9Q5JTB6 97 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 C9orf152Q5JTZ5 239 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 UQCC3Q6UW78 93 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 GLIPR1L1Q6UWM5 242 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF704Q6ZNC4 412 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 Q6ZRG5 221 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 PHYHIPLQ96FC7 376 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 GPER1Q99527 375 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 MMP26Q9NRE1 261 aa11.07□□□□□ -0.64
SFSWAP-208ENST00000539506 LPAR3Q9UBY5 353 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms