RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 MEIKINA0A087WXM9 373 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 E5RGE8 158 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 MT-ND4LP03901 98 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 NDUFB7P17568 137 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 EMP3P54852 163 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF92Q03936 586 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 IL34Q6ZMJ4 242 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 NSG2Q9Y328 171 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 GP1BAP07359 652 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 SUMO3P55854 103 aaPredicted RBP13.02□□□□□ -0.33
CACNB1-206ENST00000539338 CBLN3Q6UW01 205 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 C16orf47Q6ZP98 133 aaPredicted RBP13.02□□□□□ -0.33
CACNB1-206ENST00000539338 MED9Q9NWA0 146 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 OR5V1Q9UGF6 321 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 POLDIP2Q9Y2S7 368 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 SH2D1BO14796 132 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 NDUFB6O95139 128 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 ARR3P36575 388 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 THBS3P49746 956 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 CEACAM16Q2WEN9 425 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 OR1L3Q8NH93 324 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 C4orf45Q96LM5 186 aa13.02□□□□□ -0.33
CACNB1-206ENST00000539338 BCL2L11O43521 198 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 C21orf58P58505 322 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 SSBP1Q04837 148 aaKnown RBP13.01□□□□□ -0.33
CACNB1-206ENST00000539338 BAGE3Q86Y29 109 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 BAGE2Q86Y30 109 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 GUCD1Q96NT3 240 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 FN3KRPQ9HA64 309 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 TMEM272A0A1B0GTI8 110 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 NKX6-3A6NJ46 265 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 BHLHE40O14503 412 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 AQP7O14520 342 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 FAM199XQ6PEV8 388 aaPredicted RBP13.01□□□□□ -0.33
CACNB1-206ENST00000539338 ZDHHC23Q8IYP9 409 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 GCNT2Q8N0V5 402 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 OSR2Q8N2R0 312 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 A0A087WZY1 265 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 ARPC3O15145 178 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 ZIC1Q15915 447 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF626Q68DY1 528 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 RPUSD3Q6P087 351 aaKnown RBP13.01□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF573Q86YE8 665 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 DEFB108BQ8NET1 73 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 PLEKHA2Q9HB19 425 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 FAM60AQ9NP50 221 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 HIF1ANQ9NWT6 349 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 CBR3O75828 277 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 IL5P05113 134 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 PDCD1Q15116 288 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF239Q16600 458 aaKnown RBP13.01□□□□□ -0.33
CACNB1-206ENST00000539338 TRILQ7L0X0 811 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 OR10G3Q8NGC4 313 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 OR2I1PQ8NGU4 316 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 MOGAT1Q96PD6 335 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 ABHD1Q96SE0 405 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF768Q9H5H4 540 aaKnown RBP13.01□□□□□ -0.33
CACNB1-206ENST00000539338 FAM96BQ9Y3D0 163 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 DOCK5Q9H7D0 1870 aa13.01□□□□□ -0.33
CACNB1-206ENST00000539338 FOCADQ5VW36 1801 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 NUDT19A8MXV4 375 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 RER1O15258 196 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 OR2B8PP59922 312 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 TMEM128Q5BJH2 165 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 KHDC1LQ5JSQ8 128 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF439Q8NDP4 499 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 GNPNAT1Q96EK6 184 aaPredicted RBP13□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF355PQ9NSJ1 428 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 P4HTMQ9NXG6 502 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 GALP22466 123 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 GLRA1P23415 457 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 THNSL2Q86YJ6 484 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 ARHGEF39Q8N4T4 335 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 C15orf54Q8N8G6 183 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 PPP1R14DQ9NXH3 145 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 LY75O60449 1722 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 SEMG1P04279 462 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 C1orf87Q8N0U7 546 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 NIT2Q9NQR4 276 aa13□□□□□ -0.33
CACNB1-206ENST00000539338 ZNF230Q9UIE0 474 aaPredicted RBP13□□□□□ -0.33
CACNB1-206ENST00000539338 TMEM127O75204 238 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 C1QCP02747 245 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 CD37P11049 281 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 NPBWR1P48145 328 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 TOMM34Q15785 309 aaPredicted RBP12.99□□□□□ -0.33
CACNB1-206ENST00000539338 SPATA46Q5T0L3 261 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 C11orf87Q6NUJ2 197 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 HIST2H3AQ71DI3 136 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 NECAP1Q8NC96 275 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 RNF150Q9ULK6 438 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 RFPL4AA6NLU0 287 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 RFPL4AL1F8VTS6 287 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 HABP2Q14520 560 aaPredicted RBP12.99□□□□□ -0.33
CACNB1-206ENST00000539338 FAM185AQ8N0U4 392 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 MUC20Q8N307 709 aaPredicted RBP12.99□□□□□ -0.33
CACNB1-206ENST00000539338 GNRHR2Q96P88 292 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 RIMS4Q9H426 269 aaPredicted RBP12.99□□□□□ -0.33
CACNB1-206ENST00000539338 SSUH2Q9Y2M2 353 aa12.99□□□□□ -0.33
CACNB1-206ENST00000539338 TRIM77I1YAP6 450 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms