RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 RPL5P46777 297 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 SYT6Q5T7P8 510 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 TMEM244Q5VVB8 128 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 NAA40Q86UY6 237 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 MYPOPQ86VE0 399 aaPredicted RBP10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF485Q8NCK3 441 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 OR1J1Q8NGS3 322 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 TSEN15Q8WW01 171 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 SMIM19Q96E16 107 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 OPALINQ96PE5 141 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 C1QTNF5Q9BXJ0 243 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 TMPRSS13Q9BYE2 586 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 BCL2L14Q9BZR8 327 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 FAM206AQ9NX38 181 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 TREM2Q9NZC2 230 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 PTTG3PQ9NZH4 202 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 NUFIP1Q9UHK0 495 aaKnown RBP10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 SLC22A13Q9Y226 551 aa10.58□□□□□ -0.72
CLSTN3-208ENST00000538933 TRAV20A0A0B4J274 112 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 POM121CA8CG34 1229 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 VSTM5A8MXK1 200 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 J3QW42 95 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 P2RY10O00398 339 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 OGG1O15527 345 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 NOL3O60936 208 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 FSHBP01225 129 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 CPEP16870 476 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 CFL1P23528 166 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 CALCRP30988 508 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 THBS4P35443 961 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 CCR9P51686 369 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 RPS23P62266 143 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 SNTB2Q13425 540 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 GPR50Q13585 617 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 TRAM1Q15629 374 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 SNAI3Q3KNW1 292 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 KRTAP27-1Q3LI81 207 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 FBLN7Q53RD9 439 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 DMKNQ6E0U4 476 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 FDX2Q6P4F2 183 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 VHLLQ6RSH7 139 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 MRPL21Q7Z2W9 205 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 ELMOD2Q8IZ81 293 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 PAQR4Q8N4S7 273 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 OR8B12Q8NGG6 310 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 OR51F2Q8NH61 342 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 DVL3Q92997 716 aaPredicted RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 PDCD1LG2Q9BQ51 273 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 TMED9Q9BVK6 235 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 SLITRK2Q9H156 845 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 PLEKHA1Q9HB21 404 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 EXOSC4Q9NPD3 245 aaKnown RBP10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 TBCCD1Q9NVR7 557 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 FRRS1LQ9P0K9 344 aa10.57□□□□□ -0.72
CLSTN3-208ENST00000538933 H3BSH0 61 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 SYT7O43581 403 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 PLPP2O43688 288 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 SRSF10O75494 262 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 MTRF1O75570 445 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 SERPINA3P01011 423 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 TTRP02766 147 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF35P13682 527 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 CD36P16671 472 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF12P17014 697 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 ADRA2CP18825 462 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 ACHEP22303 614 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 COL8A2P25067 703 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 PSMA1P25786 263 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 GCH1P30793 250 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 WNT5AP41221 380 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 KIR3DL2P43630 455 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 GP2P55259 537 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 UCP2P55851 309 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 NANOS3P60323 173 aaKnown RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 PPP1CBP62140 327 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 TPBGQ13641 420 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 RSPO1Q2MKA7 263 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 TIMM50Q3ZCQ8 353 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 RGS7BPQ6MZT1 257 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 RFPL4BQ6ZWI9 263 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 C1orf174Q8IYL3 243 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 PRSS35Q8N3Z0 413 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 MS4A15Q8N5U1 240 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 TEX29Q8N6K0 151 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 NUP37Q8NFH4 326 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 OR2AE1Q8NHA4 323 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 OR51E1Q8TCB6 317 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 GHSRQ92847 366 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 REEP6Q96HR9 211 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 FAM71F1Q96KD3 344 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 C1orf147Q96MC9 270 aaPredicted RBP10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 RGCCQ9H4X1 137 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 OPA3Q9H6K4 179 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 NARFLQ9H6Q4 476 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF442Q9H7R0 627 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 GPR84Q9NQS5 396 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 ZNF391Q9UJN7 358 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 HHLA2Q9UM44 414 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 PPIAL4AQ9Y536 164 aa10.56□□□□□ -0.72
CLSTN3-208ENST00000538933 A0A0U1RQV5 110 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms