RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CYB5R3P00387 301 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 PNPP00491 289 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 TFP02787 698 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 RLN2P04090 185 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 F13BP05160 661 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SPARCP09486 303 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 PAX1P15863 534 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SPI1P17947 270 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 MAKP20794 623 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 DTYMKP23919 212 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 PEX2P28328 305 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 UQCRFS1P47985 274 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SELENOPP49908 381 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 IDH3GP51553 393 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 FGF8P55075 233 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 BDH1Q02338 343 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ACSM1Q08AH1 577 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 CCNIQ14094 377 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 GGTLC2Q14390 218 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 HSD17B12Q53GQ0 312 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 C12orf73Q69YU5 71 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 DESI1Q6ICB0 168 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF474Q6S9Z5 364 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SPNS3Q6ZMD2 512 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 C17orf107Q6ZR85 190 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 DOK3Q7L591 496 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 TMEM17Q86X19 198 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 RBM45Q8IUH3 476 aaKnown RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 CCDC103Q8IW40 242 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 Q8IYB0 196 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 MS4A15Q8N5U1 240 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZIC4Q8N9L1 334 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZBTB34Q8NCN2 500 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 BHLHE23Q8NDY6 225 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 OR6N2Q8NGY6 317 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 OR4K13Q8NH42 304 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 RNASE8Q8TDE3 154 aaKnown RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 LRTOMTQ8WZ04 291 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 TSPAN32Q96QS1 320 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 FOXC2Q99958 501 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 PIMREGQ9BSJ6 248 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 MRI1Q9BV20 369 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 KRTAP17-1Q9BYP8 105 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 HMG20AQ9NP66 347 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 CISD1Q9NZ45 108 aaKnown RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 GHRLQ9UBU3 117 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 IKZF2Q9UKS7 526 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 POLDIP2Q9Y2S7 368 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 CHST2Q9Y4C5 530 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 FER1L5A0AVI2 2057 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 IGHV3-15A0A0B4J1V0 119 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 LOC100130705A0A1B0GUX0 176 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 OR5B21A6NL26 309 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 BHLHE40O14503 412 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 DLEU1O43261 78 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 TIMM8AO60220 97 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 RGS9O75916 674 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 LYZL6O75951 148 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SCGNO76038 276 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 FSTL3O95633 263 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 GASTP01350 101 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 IFNA2P01563 188 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 IGKV3-15P01624 115 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 IGLV1-44P01699 117 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 LCATP04180 440 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ADH4P08319 380 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 HTR1AP08908 422 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZP3P21754 424 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 STOMP27105 288 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 PSMB6P28072 239 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SHC1P29353 583 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SLC6A9P48067 706 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF81P51508 661 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF83P51522 516 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 EIF2B1Q14232 305 aaKnown RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF672Q499Z4 452 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 PABPC1L2AQ5JQF8 200 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ATPAF1Q5TC12 328 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 LPCAT3Q6P1A2 487 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 KRTAP1-3Q8IUG1 177 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SLC35F2Q8IXU6 374 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 CBR4Q8N4T8 237 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 SPICQ8N5J4 248 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 PNLDC1Q8NA58 520 aaKnown RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZSCAN4Q8NAM6 433 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 OR52N5Q8NH56 324 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZNF420Q8TAQ5 688 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ZFAND1Q8TCF1 268 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 NUDT8Q8WV74 236 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 PCNPQ8WW12 178 aaKnown RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 CYGBQ8WWM9 190 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 R3HDM4Q96D70 268 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 LINC00052Q96N35 136 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 ALKBH3Q96Q83 286 aaPredicted RBP3.11□□□□□ -1.91
PTPN22-211ENST00000538253 S100A13Q99584 98 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 TMEM204Q9BSN7 226 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 RTL8AQ9BWD3 113 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 GSX2Q9BZM3 304 aa3.11□□□□□ -1.91
PTPN22-211ENST00000538253 RTN4RQ9BZR6 473 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms