RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 DTX1Q86Y01 620 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 FAM89BQ8N5H3 189 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 OR4K15Q8NH41 348 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 AKR7LQ8NHP1 331 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 PIGTQ969N2 578 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 SPSB1Q96BD6 273 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 ELMOD3Q96FG2 381 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 DPCDQ9BVM2 203 aaPredicted RBP13.68□□□□□ -0.22
MKS1-204ENST00000537529 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 FAM166BA8MTA8 275 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 L7N2F9 121 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 M0R233 179 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 MRPL33O75394 65 aaKnown RBP13.68□□□□□ -0.22
MKS1-204ENST00000537529 CELA3AP09093 270 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 CLDN18P56856 261 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 PSG4Q00888 419 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 SRYQ05066 204 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 NRN1LQ496H8 165 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 SLC25A42Q86VD7 318 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 ARHGAP5-AS1Q96IT6 56 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 LINC00470Q9BZP3 86 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 WNT5BQ9H1J7 359 aa13.68□□□□□ -0.22
MKS1-204ENST00000537529 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.68□□□□□ -0.22
MKS1-204ENST00000537529 NFYAP23511 347 aaPredicted RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 MAGEA5P43359 124 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 TMEM50BP56557 158 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 HGFACQ04756 655 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 DHRS2Q13268 280 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 ARFRP1Q13795 201 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 GK2Q14410 553 aaPredicted RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 CNN3Q15417 329 aaKnown RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 GRK1Q15835 563 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 DMRTC1Q5HYR2 192 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 CLVS2Q5SYC1 327 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 OR2AE1Q8NHA4 323 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 OCSTAMPQ9BR26 566 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 SLC6A15Q9H2J7 730 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 RGCCQ9H4X1 137 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 GPR173Q9NS66 373 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 PARPBPQ9NWS1 579 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 KLF13Q9Y2Y9 288 aaPredicted RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 MPC2O95563 127 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 HLA-AP01891 365 aaKnown RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 PMP2P02689 132 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 PATE4P0C8F1 98 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 ZNF708P17019 499 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 SERPINA2P20848 420 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 PRKACBP22694 351 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 CD34P28906 385 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 OPCMLQ14982 345 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 ARL6IP1Q15041 203 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 DCAF12L2Q5VW00 463 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 C1QL2Q7Z5L3 287 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 SKA3Q8IX90 412 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 TMEM251Q8N6I4 163 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 IL22RA1Q8N6P7 574 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 WDR89Q96FK6 387 aaPredicted RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 TM2D1Q9BX74 207 aa13.67□□□□□ -0.22
MKS1-204ENST00000537529 ELL3Q9HB65 397 aaPredicted RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 MCTS1Q9ULC4 181 aaKnown RBP13.67□□□□□ -0.22
MKS1-204ENST00000537529 LOC100509620A0A075B734 347 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 HMSDA8MTL9 139 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 RAD51DO75771 328 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 CXCL2P19875 107 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 CPT2P23786 658 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 ACKR3P25106 362 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 GMFBP60983 142 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 SEC61A1P61619 476 aaKnown RBP13.66□□□□□ -0.22
MKS1-204ENST00000537529 STK11Q15831 433 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 VAX1Q5SQQ9 334 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 TSPO2Q5TGU0 170 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 FAHD2BQ6P2I3 314 aaPredicted RBP13.66□□□□□ -0.22
MKS1-204ENST00000537529 C17orf107Q6ZR85 190 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 LYG2Q86SG7 212 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 FAHD2AQ96GK7 314 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 UBQLN2Q9UHD9 624 aa13.66□□□□□ -0.22
MKS1-204ENST00000537529 OR6C65A6NJZ3 312 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 FOXI3A8MTJ6 420 aaPredicted RBP13.65□□□□□ -0.22
MKS1-204ENST00000537529 CDK2AP1O14519 115 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 NME2P1O60361 137 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 NOS1APO75052 506 aaPredicted RBP13.65□□□□□ -0.22
MKS1-204ENST00000537529 SP1P08047 785 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 NME2P22392 152 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 BLVRBP30043 206 aaPredicted RBP13.65□□□□□ -0.22
MKS1-204ENST00000537529 MTCP1P56278 107 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 SPEM2Q0P670 501 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 IKZF1Q13422 519 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 TRIP6Q15654 476 aaKnown RBP13.65□□□□□ -0.22
MKS1-204ENST00000537529 MICBQ29980 383 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 RSPO4Q2I0M5 234 aaPredicted RBP13.65□□□□□ -0.22
MKS1-204ENST00000537529 RTL6Q6ICC9 239 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 GALNTL5Q7Z4T8 443 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 ARRDC1Q8N5I2 433 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 OR10K1Q8NGX5 313 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 MRGPRFQ96AM1 343 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 ATPIF1Q9UII2 106 aa13.65□□□□□ -0.22
MKS1-204ENST00000537529 NOP16Q9Y3C1 178 aaKnown RBP13.65□□□□□ -0.22
MKS1-204ENST00000537529 COL6A3P12111 3177 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms