RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	DNAH2	Q9P225	4427 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	PKHD1	P08F94	4074 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	RBMY1B	A6NDE4	496 aa	Known RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	RBMY1E	A6NEQ0	496 aa	Known RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ODF3B	A8MYP8	253 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	NDUFAB1	O14561	156 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	PTP4A3	O75365	173 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	AMY1A	P04745	511 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	AMY2A	P04746	511 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ARG1	P05089	322 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ACAA1	P09110	424 aa	Predicted RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	RBMY1D	P0C7P1	496 aa	Known RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	PSG2	P11465	335 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	CHAT	P28329	748 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ECI1	P42126	302 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	SLC25A1	P53007	311 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	DLX6	P56179	175 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	TPTE	P56180	551 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	LGALS4	P56470	323 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	CAV3	P56539	151 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	VSNL1	P62760	191 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	FAM3A	P98173	230 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	DCTN2	Q13561	401 aa	Known RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	BLMH	Q13867	455 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	NFYC	Q13952	458 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	SNCB	Q16143	134 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	VMAC	Q2NL98	169 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	KRT71	Q3SY84	523 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ZBED5	Q49AG3	693 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ABCA11P	Q4W5N1	156 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	TNFAIP8L3	Q5GJ75	292 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	TMEM200B	Q69YZ2	307 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	EPGN	Q6UW88	154 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	EGFL6	Q8IUX8	553 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	KIRREL3	Q8IZU9	778 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	MREG	Q8N565	214 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	FAM156A	Q8NDB6	213 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	OR8S1	Q8NH09	359 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	OR5K1	Q8NHB7	308 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	RPS4Y2	Q8TD47	263 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	HPSE2	Q8WWQ2	592 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	C12orf43	Q96C57	262 aa	Known RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	PRRC1	Q96M27	445 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	CGREF1	Q99674	301 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	TLNRD1	Q9H1K6	362 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	NRIP3	Q9NQ35	241 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	THAP1	Q9NVV9	213 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	C14orf119	Q9NWQ9	140 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	ZNF319	Q9P2F9	582 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	CYB5R1	Q9UHQ9	305 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	CORO2B	Q9UQ03	480 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	NOP16	Q9Y3C1	178 aa	Known RBP	4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	RHBDD3	Q9Y3P4	386 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	HILPDA	Q9Y5L2	63 aa		4.14	□□□□□ -1.75
CHD4-205	ENST00000536301	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	TVP23A	A6NH52	213 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	OR2AT4	A6NND4	320 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	FAM90A22P	A8MWA6	464 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	F2RL2	O00254	374 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	RGS16	O15492	202 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	AHCYL1	O43865	530 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	CLIC3	O95833	236 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	IFNW1	P05000	195 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	PIP	P12273	146 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	OTX1	P32242	354 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	DCTD	P32321	178 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	PYCR1	P32322	319 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	GRK5	P34947	590 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	ENTPD1	P49961	510 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	IDH3A	P50213	366 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	RAB25	P57735	213 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	STX1B	P61266	288 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	RPL23A	P62750	156 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	GNGT1	P63211	74 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	ST3GAL3	Q11203	375 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	DEFB136	Q30KP8	78 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	ANKDD1A	Q495B1	522 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	LRRC23	Q53EV4	343 aa	Predicted RBP	4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	CYBRD1	Q53TN4	286 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	ZNF626	Q68DY1	528 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	UNQ9370/PRO34162	Q6UXP9	181 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	BAIAP2L2	Q6UXY1	529 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	LCNL1	Q6ZST4	164 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	SLC16A9	Q7RTY1	509 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	OR2W3	Q7Z3T1	314 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	VTCN1	Q7Z7D3	282 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	OFCC1	Q8IZS5	231 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	BATF2	Q8N1L9	274 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	CD177	Q8N6Q3	437 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	DTX3	Q8N9I9	347 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	EIF1AD	Q8N9N8	165 aa	Known RBP	4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	OR4X2	Q8NGF9	303 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	OR52H1	Q8NGJ2	320 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	SPSB4	Q96A44	273 aa		4.13	□□□□□ -1.75
CHD4-205	ENST00000536301	SGK3	Q96BR1	496 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms