RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 MIEN1Q9BRT3 115 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SYT17Q9BSW7 474 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FAAP24Q9BTP7 215 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 GABARAPL3Q9BY60 117 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 FGFBP2Q9BYJ0 223 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR2J1Q9GZK6 312 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SLC25A31Q9H0C2 315 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TMEM117Q9H0C3 514 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 MAGT1Q9H0U3 335 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CST9LQ9H4G1 147 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 METTL7AQ9H8H3 244 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ACTR8Q9H981 624 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RHOFQ9HBH0 211 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 HHATLQ9HCP6 504 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 LTB4R2Q9NPC1 389 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TUBG2Q9NRH3 451 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 LYRM2Q9NU23 88 aaPredicted RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 ASF1BQ9NVP2 202 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 RBM22Q9NW64 420 aaKnown RBP eCLIP2.16□□□□□ -2.06
SKA3-207ENST00000536239 TXNL4BQ9NX01 149 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 TMEM161AQ9NX61 479 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 ALKBH4Q9NXW9 302 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TAS2R5Q9NYW4 299 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 IL17CQ9P0M4 197 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 B3GAT1Q9P2W7 334 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 CACFD1Q9UGQ2 172 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 VAX2Q9UIW0 290 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 SLC13A4Q9UKG4 626 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 IKZF2Q9UKS7 526 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 NIP7Q9Y221 180 aaKnown RBP eCLIP2.16□□□□□ -2.06
SKA3-207ENST00000536239 EXOSC1Q9Y3B2 195 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 OR10H1Q9Y4A9 318 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TBL2Q9Y4P3 447 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 UBIAD1Q9Y5Z9 338 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 TDRD15B5MCY1 1934 aaKnown RBP2.16□□□□□ -2.06
SKA3-207ENST00000536239 FOCADQ5VW36 1801 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 COL24A1Q17RW2 1714 aa2.16□□□□□ -2.06
SKA3-207ENST00000536239 COL4A4P53420 1690 aaPredicted RBP2.15□□□□□ -2.06
SKA3-207ENST00000536239 MIA3Q5JRA6 1907 aa2.15□□□□□ -2.06
SKA3-207ENST00000536239 COL1A1P02452 1464 aaPredicted RBP2.15□□□□□ -2.06
SKA3-207ENST00000536239 PXDNQ92626 1479 aa2.15□□□□□ -2.06
SKA3-207ENST00000536239 BTAF1O14981 1849 aa2.15□□□□□ -2.06
SKA3-207ENST00000536239 ARID2Q68CP9 1835 aa2.15□□□□□ -2.06
SKA3-207ENST00000536239 PEAK1Q9H792 1746 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 IGLV5-45A0A087WSX0 123 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 KCNE1BA0A087WTH5 132 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 FXYD6-FXYD2A0A087WZ82 144 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 NPIPA5A0A0B4J1W7 369 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 A0A0G2JN53 185 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZCWPW2A0A1B0GU75 182 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TRDV1A0A1B0GX56 115 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 hCG_1809904A0A1W2PP81 198 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 A0A1W2PPE2 198 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 A0A1W2PPV4 95 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 A0A1W2PR64 198 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 IRGMA1A4Y4 181 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 A4D1N5 150 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR5H14A6NHG9 310 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF705GA8MUZ8 300 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 IDSB3KWA1 339 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 NPIPA5E9PKD4 350 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 NPIPA3F8WFD2 350 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SULT2B1O00204 365 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CORTO00230 105 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SLC33A1O00400 549 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 MANBAO00462 879 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF593O00488 134 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 FAAHO00519 579 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ARPC3O15145 178 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CTDSPLO15194 276 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 B4GALT5O43286 388 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ZNF749O43361 778 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 GSTZ1O43708 216 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 TLX2O43763 284 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 MFSD11O43934 449 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 PRKNO60260 465 aaPredicted RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 TPST2O60704 377 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BKO60814 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CTSVO60911 334 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 TNFSF13O75888 250 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 FARS2O95363 451 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR2C1O95371 312 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ACTL6AO96019 429 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CST4P01036 141 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 JCHAINP01591 159 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 IGHV4-39P01824 125 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SEMG1P04279 462 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ARG1P05089 322 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HIST1H2BJP06899 126 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CHRM4P08173 479 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SOD3P08294 240 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 CD14P08571 375 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 ADRA2AP08913 450 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 HNRNPA1P09651 372 aaKnown RBP eCLIP2.15□□□□□ -2.07
SKA3-207ENST00000536239 SFTA3P0C7M3 94 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 OR5H8P0DN80 308 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SLC25A4P12235 298 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 SELEP16581 610 aa2.15□□□□□ -2.07
SKA3-207ENST00000536239 PSMB1P20618 241 aaKnown RBP2.15□□□□□ -2.07
SKA3-207ENST00000536239 PRKACGP22612 351 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms