RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 AADACL3Q5VUY0 350 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 LYSMD4Q5XG99 296 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 CRIP3Q6Q6R5 217 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 Q6ZSR3 168 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 HIST2H3AQ71DI3 136 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 Q7L0L9 218 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 C1QL2Q7Z5L3 287 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 CCDC54Q8NEL0 328 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 ANGPTL4Q9BY76 406 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 ZC4H2Q9NQZ6 224 aa14.08□□□□□ -0.15
CHMP1A-202ENST00000535997 MYO7BQ6PIF6 2116 aa14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 FGF16O43320 207 aa14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 TPT1P13693 172 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 BLVRBP30043 206 aaPredicted RBP14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 SLC6A9P48067 706 aa14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 SNU13P55769 128 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 SUPT4H1P63272 117 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 ENDOGQ14249 297 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 UBE2V2Q15819 145 aa14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 SLC30A7Q8NEW0 376 aa14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 BPIFCQ8NFQ6 507 aa14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 RHBDD1Q8TEB9 315 aa14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 NAA11Q9BSU3 229 aaPredicted RBP14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 FLVCR1Q9Y5Y0 555 aa14.08□□□□□ -0.16
CHMP1A-202ENST00000535997 STMND1H3BQB6 276 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 MTRF1O75570 445 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 LYL1P12980 280 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 OTX1P32242 354 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 DSCR4P56555 118 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 PPA1Q15181 289 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 EXT1Q16394 746 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 RSPO1Q2MKA7 263 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 RTL6Q6ICC9 239 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 BAP18Q8IXM2 172 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 OR13G1Q8NGZ3 307 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 HAS2Q92819 552 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 INTS12Q96CB8 462 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 IMMP1LQ96LU5 166 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 GNRHR2Q96P88 292 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 S100A13Q99584 98 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 TM2D1Q9BX74 207 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 CHST5Q9GZS9 411 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 PCDHB10Q9UN67 800 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 OSGIN2Q9Y236 505 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 IGHV1-45A0A0A0MS14 117 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 C5orf63A6NC05 138 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 NPIPA2E9PIF3 369 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 NPIPA3F8WFD2 350 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 DHHO43323 396 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 KCNAB3O43448 404 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 CA11O75493 328 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 CSNK2A1P68400 391 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 SURF2Q15527 256 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 SLC9A3R2Q15599 337 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 PLEKHN1Q494U1 663 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 PHYHD1Q5SRE7 291 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 ATRAIDQ6UW56 229 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 CSNK2A3Q8NEV1 391 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 OR5D18Q8NGL1 313 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 NABP1Q96AH0 204 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 LRRC46Q96FV0 321 aa14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 LIN37Q96GY3 246 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 ZNF385AQ96PM9 386 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-202ENST00000535997 FIGNL2A6NMB9 653 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 H0YIZ8 118 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 ZIC3O60481 467 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 KLK3P07288 261 aaPredicted RBP14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 CD63P08962 238 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 HLA-BQ31612 363 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 PRSS54Q6PEW0 395 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 TMEM123Q8N131 208 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 EMG1Q92979 244 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 RRNAD1Q96FB5 475 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 ZC3H10Q96K80 434 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 RBM24Q9BX46 236 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 PECRQ9BY49 303 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 ZNF700Q9H0M5 742 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 TMEM100Q9NV29 134 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 OR5H15A6NDH6 313 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 MPTX1A8MV57 137 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 ADAP1O75689 374 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 FCGR2AP12318 317 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 LIFP15018 202 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 CTRB1P17538 263 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 PI3P19957 117 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 CPT2P23786 658 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 DEFA5Q01523 94 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 MC2RQ01718 297 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 DMRTC1Q5HYR2 192 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 CTRB2Q6GPI1 263 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 FAM122CQ6P4D5 195 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 LRRC18Q8N456 261 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 ZSCAN4Q8NAM6 433 aaPredicted RBP14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 OR9K2Q8NGE7 335 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 OR52H1Q8NGJ2 320 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 OR1S2Q8NGQ3 325 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 RNF141Q8WVD5 230 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 NTNG2Q96CW9 530 aa14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 NECAB3Q96P71 396 aaPredicted RBP14.06□□□□□ -0.16
CHMP1A-202ENST00000535997 EHFQ9NZC4 300 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms