RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 MFGE8Q08431 387 aaPredicted RBP13.68□□□□□ -0.22
ATL3-202ENST00000535789 LCN1P1Q5VSP4 162 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 KLBQ86Z14 1044 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 GCSAMQ8N6F7 178 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 PGAM5Q96HS1 289 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 YIPF3Q9GZM5 350 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 SLC22A4Q9H015 551 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 SCN3BQ9NY72 215 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 BLOC1S6Q9UL45 172 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 PCDHB10Q9UN67 800 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 EXOGQ9Y2C4 368 aaKnown RBP13.68□□□□□ -0.22
ATL3-202ENST00000535789 TPRKBQ9Y3C4 175 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 RHBDD3Q9Y3P4 386 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 PPIAL4AQ9Y536 164 aa13.68□□□□□ -0.22
ATL3-202ENST00000535789 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.67□□□□□ -0.22
ATL3-202ENST00000535789 J3QLI3 93 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 J3QRE1 110 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 TNFRSF13BO14836 293 aaPredicted RBP13.67□□□□□ -0.22
ATL3-202ENST00000535789 RGS9O75916 674 aaPredicted RBP13.67□□□□□ -0.22
ATL3-202ENST00000535789 IGLV3-1P01715 115 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 ROM1Q03395 351 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 RAB40BQ12829 278 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 KLF17Q5JT82 389 aaPredicted RBP13.67□□□□□ -0.22
ATL3-202ENST00000535789 ZNF841Q6ZN19 808 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 AHSA2Q719I0 299 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 SSX6Q7RTT6 188 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 OR52H1Q8NGJ2 320 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 OR52I1Q8NGK6 324 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 SPATA3Q8NHX4 192 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 HPSE2Q8WWQ2 592 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 ERGIC1Q969X5 290 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 PPP1R14AQ96A00 147 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 ITPKCQ96DU7 683 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 OR8B4Q96RC9 309 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 CNN2Q99439 309 aaKnown RBP13.67□□□□□ -0.22
ATL3-202ENST00000535789 OR10A2Q9H208 303 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 LAMP5Q9UJQ1 280 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 INSIG2Q9Y5U4 225 aa13.67□□□□□ -0.22
ATL3-202ENST00000535789 PTGES3LE9PB15 166 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 VENTXO95231 258 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 APOL3O95236 402 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 APOC1P02654 83 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 RPSAP08865 295 aaKnown RBP13.66□□□□□ -0.22
ATL3-202ENST00000535789 SMIM18P0DKX4 95 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 EPHA1P21709 976 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 DDOSTP39656 456 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 PSMB10P40306 273 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 POU4F2Q12837 409 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 ZNF154Q13106 437 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 TUSC1Q2TAM9 212 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 KLHL22Q53GT1 634 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 SFRP4Q6FHJ7 346 aaPredicted RBP13.66□□□□□ -0.22
ATL3-202ENST00000535789 PLEKHG7Q6ZR37 379 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 KRT77Q7Z794 578 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 C1orf87Q8N0U7 546 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 OR51G2Q8NGK0 314 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 TMEM158Q8WZ71 300 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 C19orf24Q9BVV8 132 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 SSBP3Q9BWW4 388 aaPredicted RBP13.66□□□□□ -0.22
ATL3-202ENST00000535789 C7orf69Q9H7B7 122 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 FN3KRPQ9HA64 309 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 FGF20Q9NP95 211 aaPredicted RBP13.66□□□□□ -0.22
ATL3-202ENST00000535789 C1orf123Q9NWV4 160 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 ERVK-18Q9QC07 812 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 RNF7Q9UBF6 113 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 METRNQ9UJH8 293 aa13.66□□□□□ -0.22
ATL3-202ENST00000535789 A0A1B0GW55 424 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 MAGEA13PA6NCF6 341 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 LRRC30A6NM36 301 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 LHBP01229 141 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 IGHA1P01876 353 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 CDK1P06493 297 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 GRPP07492 148 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DUX4L2P0CJ85 424 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DUX4L3P0CJ86 424 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DUX4L4P0CJ87 422 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DUX4L5P0CJ88 424 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DUX4L6P0CJ89 424 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DUX4L7P0CJ90 424 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 GATA3P23771 443 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 ST3GAL4Q11206 333 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 ESCO2Q56NI9 601 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DUX4L9Q6RFH8 374 aaPredicted RBP13.65□□□□□ -0.22
ATL3-202ENST00000535789 DCDC5Q6ZRR9 648 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 FAM90A1Q86YD7 464 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 SLC35F2Q8IXU6 374 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 PLPP7Q8NBV4 271 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 OR1M1Q8NGA1 313 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 OR11L1Q8NGX0 322 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 SEH1LQ96EE3 360 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 NEIL1Q96FI4 390 aaPredicted RBP13.65□□□□□ -0.22
ATL3-202ENST00000535789 PAPOLGQ9BWT3 736 aaKnown RBP13.65□□□□□ -0.22
ATL3-202ENST00000535789 JAM3Q9BX67 310 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 TLNRD1Q9H1K6 362 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 RGCCQ9H4X1 137 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 SMURF1Q9HCE7 757 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DUX4Q9UBX2 424 aa13.65□□□□□ -0.22
ATL3-202ENST00000535789 DIMT1Q9UNQ2 313 aaKnown RBP13.65□□□□□ -0.22
ATL3-202ENST00000535789 NOP16Q9Y3C1 178 aaKnown RBP13.65□□□□□ -0.22
ATL3-202ENST00000535789 DSCAML1Q8TD84 2053 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms