RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CCKBRP32239 447 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 SERPINF1P36955 418 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 SUCLG1P53597 346 aaKnown RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 BTN3A2P78410 334 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 RELQ04864 619 aaPredicted RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 SIGLEC14Q08ET2 396 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 PMPCAQ10713 525 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 CHAF1BQ13112 559 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 PPP1R1AQ13522 171 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 RBM39Q14498 530 aaKnown RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 ARL6IP1Q15041 203 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 TOMM34Q15785 309 aaPredicted RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 SGCAQ16586 387 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 DUSP5Q16690 384 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 TMEM52BQ4KMG9 183 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 C14orf28Q4W4Y0 310 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 AKIRIN2Q53H80 203 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ACER2Q5QJU3 275 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ZNF776Q68DI1 518 aaPredicted RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 RTL6Q6ICC9 239 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ADAM5Q6NVV9 412 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 BTNL8Q6UX41 500 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 Q6YL49 198 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ZNF793Q6ZN11 406 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 PARS2Q7L3T8 475 aaKnown RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 SYT13Q7L8C5 426 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 NUP54Q7Z3B4 507 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 TRAPPC6BQ86SZ2 158 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 CDC20BQ86Y33 519 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ARRDC1Q8N5I2 433 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 C2orf73Q8N5S3 287 aaPredicted RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 FRMD1Q8N878 549 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ZNF614Q8N883 585 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 OR9K2Q8NGE7 335 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 OR4A4PQ8NGN8 299 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 AKR7LQ8NHP1 331 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 NT5CQ8TCD5 201 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 CASTOR1Q8WTX7 329 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 FAM131CQ96AQ9 280 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ZG16BQ96DA0 208 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 RBM14Q96PK6 669 aaKnown RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 INTS14Q96SY0 518 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 LMF2Q9BU23 707 aaKnown RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 ADAT1Q9BUB4 502 aaKnown RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 TTTY10Q9BZA0 68 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 SELENOIQ9C0D9 397 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 EIF5A2Q9GZV4 153 aaKnown RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 CST11Q9H112 138 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 SLC35B3Q9H1N7 401 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 WDR13Q9H1Z4 485 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 LYRM4Q9HD34 91 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ACKR4Q9NPB9 350 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 C2orf42Q9NWW7 574 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 ANKRD10Q9NXR5 420 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 DHCR7Q9UBM7 475 aaKnown RBP5.82□□□□□ -1.48
USP28-202ENST00000535607 KCNG2Q9UJ96 466 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 PLAGL1Q9UM63 463 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 COLEC10Q9Y6Z7 277 aa5.82□□□□□ -1.48
USP28-202ENST00000535607 TRIOO75962 3097 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 MYO10Q9HD67 2058 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 A0A087WWC5 75 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 A0A0G2JN53 185 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 A0A1B0GVT2 93 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 MEIS3P1A6NDR6 274 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 SHISA7A6NL88 538 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 B4DEV8 164 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 H7C1Q1 480 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 K7EPK0 472 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 XKRYO14609 159 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 CCSO14618 274 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 LRP3O75074 770 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 UPK3AO75631 287 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 OR6A2O95222 327 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 SFT2D2O95562 160 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 TXNDC12O95881 172 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 CD63P08962 238 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 OR8U8P0C7N1 319 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 SEC11BP0C7V7 166 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 ZNF735P0CB33 412 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 OR8G3PP0DMU2 310 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 RNH1P13489 461 aaKnown RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 HIST1H1BP16401 226 aaKnown RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 S1PR1P21453 382 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 DDTP30046 118 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 GABRA3P34903 492 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 GPX4P36969 197 aaPredicted RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 CAMLGP49069 296 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 RIDAP52758 137 aaKnown RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 NANOS3P60323 173 aaKnown RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 SURF2Q15527 256 aaPredicted RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 OR7A5Q15622 319 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 CST6Q15828 149 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 MOGAT2Q3SYC2 334 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 AWAT1Q58HT5 328 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 ABLIM2Q6H8Q1 611 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 SLC18B1Q6NT16 456 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 CRIP3Q6Q6R5 217 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 Q6ZRG5 221 aa5.81□□□□□ -1.48
USP28-202ENST00000535607 ERN2Q76MJ5 926 aaKnown RBP5.81□□□□□ -1.48
USP28-202ENST00000535607 FAM71E2Q8N5Q1 922 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms